Gene: AT1G54150

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G54150
  • Transcript Identifier AT1G54150.1
  • Gene Type Coding gene
  • Location Chr1 : 20215480-20217303 : positive

Gene Family Information

  • ID HOM05D005330
  • #Genes/#Species 142/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G54150.1
  • symbol SPL2
  • full_name SP1-like 2
  • uniprot Q9SYH3

Descriptions

  • Description E3 Ubiquitin ligase family protein
  • Computational description E3 Ubiquitin ligase family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), E3 Ubiquitin ligase (InterPro:IPR022170); BEST Arabidopsis thaliana protein match is: E3 Ubiquitin ligase family protein (TAIR:AT1G59560.1); Has 1960 Blast hits to 1959 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 1182; Fungi - 34; Plants - 350; Viruses - 140; Other Eukaryotes - 254 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006996
IEA
Gene Ontologyorganelle organization
GO:0006996
IEA
InterProorganelle organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
Gene Ontologyubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
Gene Ontologychloroplast1
GO:0009527
IEA
GOA Databaseplastid outer membrane
GO:0009707
IEA
GOA Databasechloroplast outer membrane
GO:0009941
IDA
Gene Ontologychloroplast envelope2
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044247 E3 ubiquitin-protein ligase SPL2-like
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR022170 E3 Ubiquitin ligase MUL1-like
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase