Gene: Sopen12g023810

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g023810
  • Transcript Identifier Sopen12g023810.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 60522608-60526048 : negative

Gene Family Information

  • ID HOM05D005330
  • #Genes/#Species 142/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g023810.1

Descriptions

  • Description E3 Ubiquitin ligase family protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: endomembrane system | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , E3 Ubiquitin ligase | BEST Arabidopsis thaliana protein match is: E3 Ubiquitin ligase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006996
IEA
InterProorganelle organization
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G54150
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G54150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR044247 E3 ubiquitin-protein ligase SPL2-like
IPR022170 E3 Ubiquitin ligase MUL1-like
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase