Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33070 Brassica napus
Aa31LG5G13140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis
Actinidia19541 Actinidia chinensis
Actinidia37705 Actinidia chinensis
Ah.08g210620 Amaranthus hybridus
AL3G12040 Arabidopsis lyrata
Aqoxy1G00862 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea
AT3G02660 Arabidopsis thaliana
ATR0021G047 Amborella trichopoda
Atru.BG.29.p Acer truncatum
AUR62028546 Chenopodium quinoa
AUR62033498 Chenopodium quinoa
BcaB04g19392 Brassica carinata
BcaC01g04429 Brassica carinata
BcaC09g47648 Brassica carinata
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus
BolC1t05885H Brassica oleracea
BolC1t05886H Brassica oleracea
BolC1t05887H Brassica oleracea
BolC3t16290H Brassica oleracea
BraA01t04625Z Brassica rapa
BraA01t04657Z Brassica rapa
BraA03t12477Z Brassica rapa
C03p40250 Brassica napus
CAN.G192.3 Capsicum annuum
CANSAT21G0039 Cannabis sativa
CARHR076660 Cardamine hirsuta
Ca_15026_v3 Cicer arietinum L.
CBR_g10848 Chara braunii
Cc03_g16140 Coffea canephora
CDE05G0570 Ceratophyllum demersum
CDE05G2156 Ceratophyllum demersum
CDE05G3313 Ceratophyllum demersum
Cfa002235 Carpinus fangiana
Ciclev10015023m.g Citrus clementina
CiPaw.03G253600 Carya illinoinensis
ClCG07G017190 Citrullus lanatus
COL.COLO4_17457 Corchorus olitorius
Cre13.g606050 Chlamydomonas reinhardtii
CsaV3_4G004390 Cucumis sativus L.
CSS0000006 Camellia sinensis var. sinensis
CSS0008907 Camellia sinensis var. sinensis
DCAR_005998 Daucus carota
Dinv11903 Davidia involucrata
Dinv25083 Davidia involucrata
Duzib213G0463 Durio zibethinus
ECA233G3576 Erigeron canadensis
EL10Ac7g16931 Beta vulgaris
Eucgr.I01565 Eucalyptus grandis
FAN04G0381 Fragaria x ananassa
FAN04G0607 Fragaria x ananassa
FAN05G2159 Fragaria x ananassa
FAN08G3020 Fragaria x ananassa
FAN09G2876 Fragaria x ananassa
FAN13G2026 Fragaria x ananassa
FAN18G1214 Fragaria x ananassa
FvH4_5g28930 Fragaria vesca
FvH4_6g39550 Fragaria vesca
Glyma.02G234500 Glycine max
Glyma.14G202100 Glycine max
Gohir.A01G046600 Gossypium hirsutum
Gohir.D01G037300 Gossypium hirsutum
Gorai.002G045400 Gossypium raimondii
GSVIVG01023528001 Vitis vinifera
HanXRQChr08g0226751 Helianthus annuus
Haze_25416 Corylus avellana
Haze_27256 Corylus avellana
HPP92_015556 Vanilla planifolia
HPP92_015557 Vanilla planifolia
Hund00893 Selenicereus undatus
Lalb_Chr15g0085971 Lupinus albus
Lj3g0002085 Lotus japonicus
Lj6g0011193 Lotus japonicus
Lj8A333T11 Lonicera japonica
Lsat_1_v5_gn_6_15261 Lactuca sativa
Manes.04G096400 Manihot esculenta
Mapoly0163s0012 Marchantia polymorpha
MBI04_g19169_MAGBIO Magnolia biondii
MCO13G625 Micromonas commoda
MD08G1236200 Malus domestica
MD15G1428200 Malus domestica
Medtr3g466250 Medicago truncatula
Medtr4g121070 Medicago truncatula
MELO3C017627.2 Cucumis melo
Migut.N01688 Erythranthe guttata
Migut.O00424 Erythranthe guttata
Nitab4.5_0000491g0060 Nicotiana tabacum
Nitab4.5_0000949g0050 Nicotiana tabacum
Nn1g04561 Nelumbo nucifera
Nn6g33287 Nelumbo nucifera
Oeu059313.1 Olea europaea
Oeu061455.1 Olea europaea
Os01g0500900 Oryza sativa ssp. japonica
Peaxi162Scf01038g00005 Petunia axillaris
PGR142G4255 Punica granatum
PGSC0003DMG400022992 Solanum tuberosum
Phvul.008G249300 Phaseolus vulgaris
Potri.014G140400 Populus trichocarpa
Pp3c3_3070 Physcomitrium patens
Pp3s58_130 Physcomitrium patens
PRCOL_00003633 Prasinoderma coloniale
Prupe.1G572900 Prunus persica
Psat5g150600 Pisum sativum
PSO173G0108 Papaver somniferum
PSO566G0178 Papaver somniferum
QL03p022406 Quercus lobata
QL10p019537 Quercus lobata
RcHm_v2.0_Chr7g0221241 Rosa chinensis
Rhsim08G0037300 Rhododendron simsii
Sabra14G0105800 Salix brachista
SalBow4G1042 Salvia bowleyana
Sc01g0007490 Simmondsia chinensis
Sed0026739 Sechium edule
SEGI_05348 Sequoiadendron giganteum
SEGI_33043 Sequoiadendron giganteum
SEGI_38902 Sequoiadendron giganteum
SGA_v2.0_scaffold68G22803 Striga asiatica
SMO200G0177 Selaginella moellendorffii
Solyc07g008530.1 Solanum lycopersicum
Sopen07g004450 Solanum pennellii
Sp3g01700 Schrenkiella parvula
TAR626G0946 Trochodendron aralioides
TAR633G1966 Trochodendron aralioides
TAR633G2758 Trochodendron aralioides
THA.LOC104820931 Tarenaya hassleriana
Thecc.07G135900 Theobroma cacao
Thecc.07G136200 Theobroma cacao
Thhalv10020578m.g Eutrema salsugineum
TPR.G24949 Trifolium pratense
TWI32G1353 Tripterygium wilfordii
unitig_22.g5329 Utricularia gibba
vmacro22930 Vaccinium macrocarpon
VMungo0647G1084 Vigna mungo
Zm00001eb080850 Zea mays

User provided reference genes

Program Settings