Gene: CDE05G0570
General Information
Structural Information
- Species Ceratophyllum demersum
- Gene Identifier CDE05G0570
- Transcript Identifier CDE05G0570.1
- Gene Type Coding gene
- Location 3 : 72745096-72750144 : positive
Gene Family Information
- ID HOM05D005235
- #Genes/#Species 144/95
- Phylogenetic origin
- ID ORTHO05D006938
- #Genes/#Species 136/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name gene_prefix29831
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006437 | IEA | InterPro | tyrosyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G02660 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0004831 | IEA | InterPro | tyrosine-tRNA ligase activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G02660 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G02660 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G02660 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002942 | RNA-binding S4 domain |
| IPR036955 | AP2/ERF domain superfamily |
| IPR001471 | AP2/ERF domain |
| IPR024088 | Tyrosine-tRNA ligase, bacterial-type |
| IPR016177 | DNA-binding domain superfamily |
| IPR002307 | Tyrosine-tRNA ligase |
| IPR002305 | Aminoacyl-tRNA synthetase, class Ic |
| IPR036986 | RNA-binding S4 domain superfamily |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |