Gene: Duzib213G0463

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib213G0463
  • Transcript Identifier Duzib213G0463.01
  • Gene Type Coding gene
  • Location NW_019167993.1 : 8925349-8927741 : negative

Gene Family Information

  • ID HOM05D005235
  • #Genes/#Species 144/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111275975
  • name XM_022861651.1
  • pid XP_022717386.1
  • id gene-LOC111275975
  • uniprot A0A6P5WN17

Descriptions

  • product tyrosine--tRNA ligase, chloroplastic/mitochondrial-like, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G02660
GO:0006437
IEA
GOA Databasetyrosyl-tRNA aminoacylation
GO:0006437
IEA
InterProtyrosyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0004831
IEA
GOA Databasetyrosine-tRNA ligase activity
GO:0004831
IEA
InterProtyrosine-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G02660
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G02660
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G02660

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036986 RNA-binding S4 domain superfamily
IPR002942 RNA-binding S4 domain
IPR002307 Tyrosine-tRNA ligase
IPR024088 Tyrosine-tRNA ligase, bacterial-type
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR002305 Aminoacyl-tRNA synthetase, class Ic
Mapman id Description
17.2.21 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tyrosine-tRNA ligase