Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33690 Brassica napus
A06p42830 Brassica napus
Aa31LG2G6760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3183 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1897 Anthoceros agrestis
Actinidia31052 Actinidia chinensis
Actinidia36719 Actinidia chinensis
Ah.08g209200 Amaranthus hybridus
Ah.12g055270 Amaranthus hybridus
AL5G13680 Arabidopsis lyrata
Aqoxy5G03601_Aqoxy5G03602 Aquilegia oxysepala
Aqoxy6G00475 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SLE1RG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9LFMD Arachis hypogaea
AT2G03870 Arabidopsis thaliana
ATR0605G393 Amborella trichopoda
Atru.chr11.2641 Acer truncatum
AUR62007315 Chenopodium quinoa
AUR62018690 Chenopodium quinoa
BcaB07g30643 Brassica carinata
BcaC03g17248 Brassica carinata
BcaC06g31141 Brassica carinata
BolC2t11268H Brassica oleracea
BolC7t43954H Brassica oleracea
BolC7t45182H Brassica oleracea
BraA02t08388Z Brassica rapa
BraA06t27195Z Brassica rapa
C02p51820 Brassica napus
C07p34250 Brassica napus
CAN.G397.27 Capsicum annuum
CANSAT11G1283 Cannabis sativa
CARHR146260 Cardamine hirsuta
Carub.0005s0302 Capsella rubella
Ca_27575_v3 Cicer arietinum L.
Cc02_g27590 Coffea canephora
CDE04G0027 Ceratophyllum demersum
CDE07G1423 Ceratophyllum demersum
Ciclev10033061m.g Citrus clementina
CiPaw.13G003300 Carya illinoinensis
CiPaw.13G163800 Carya illinoinensis
ClCG10G012490 Citrullus lanatus
COL.COLO4_23915 Corchorus olitorius
Cpa.g.sc3559.1 Carica papaya
Cre03.g164101 Chlamydomonas reinhardtii
CsaV3_3G032260 Cucumis sativus L.
CSS0039411 Camellia sinensis var. sinensis
DCAR_006299 Daucus carota
Dinv09372 Davidia involucrata
Dinv43460 Davidia involucrata
Duzib138G0119 Durio zibethinus
Duzib268G0815 Durio zibethinus
ECA234G2562 Erigeron canadensis
ECA234G4110 Erigeron canadensis
EL10Ac6g14102 Beta vulgaris
EL10Ac7g17127 Beta vulgaris
Eucgr.K01365 Eucalyptus grandis
FAN01G2640 Fragaria x ananassa
FAN03G3338 Fragaria x ananassa
FAN06G3906 Fragaria x ananassa
FAN10G1294 Fragaria x ananassa
FvH4_7g00800 Fragaria vesca
Glyma.05G149300 Glycine max
Glyma.08G105900 Glycine max
Glyma.12G239000 Glycine max
Gohir.A08G027400 Gossypium hirsutum
Gohir.D08G038100 Gossypium hirsutum
Gorai.004G036100 Gossypium raimondii
GSVIVG01032062001 Vitis vinifera
HanXRQChr16g0519561 Helianthus annuus
Haze_03233 Corylus avellana
Haze_23082 Corylus avellana
Haze_27705 Corylus avellana
HPP92_022787 Vanilla planifolia
Hund19747 Selenicereus undatus
Hund22069 Selenicereus undatus
Lalb_Chr12g0205961 Lupinus albus
Lalb_Chr25g0283181 Lupinus albus
Lj3g0003154 Lotus japonicus
Lj4g0005394 Lotus japonicus
Manes.10G145800 Manihot esculenta
Manes.10G146000 Manihot esculenta
Mapoly0087s0020 Marchantia polymorpha
MBI11_g24620_MAGBIO Magnolia biondii
MCO14G462 Micromonas commoda
MD02G1314900 Malus domestica
MD07G1007200 Malus domestica
Medtr7g065100 Medicago truncatula
Medtr8g036205 Medicago truncatula
MELO3C000014.2 Cucumis melo
MELO3C023964.2 Cucumis melo
MELO3C030676.2 Cucumis melo
Migut.H01631 Erythranthe guttata
Migut.N01478 Erythranthe guttata
MSTRG.5012 Avicennia marina
Nitab4.5_0002068g0050 Nicotiana tabacum
Nitab4.5_0023856g0010 Nicotiana tabacum
Nn2g15393 Nelumbo nucifera
Nn7g36187 Nelumbo nucifera
Oeu039120.1 Olea europaea
Oeu064261.1 Olea europaea
Os08g0177700 Oryza sativa ssp. japonica
Peaxi162Scf00200g01315 Petunia axillaris
PGR119G1849 Punica granatum
PGSC0003DMG400002694 Solanum tuberosum
Phvul.L003846 Phaseolus vulgaris
Potri.001G269500 Populus trichocarpa
Potri.009G064000 Populus trichocarpa
Pp3c3_27830 Physcomitrium patens
Pp3c4_9640 Physcomitrium patens
Pp3c8_4480 Physcomitrium patens
Prupe.2G010100 Prunus persica
Psat4g195040 Pisum sativum
PSO210G4938 Papaver somniferum
PSO447G0208 Papaver somniferum
QL02p017788 Quercus lobata
QL02p017866 Quercus lobata
QL04p005416 Quercus lobata
RcHm_v2.0_Chr1g0314961 Rosa chinensis
Rhsim07G0054400 Rhododendron simsii
Sabra01G0090000 Salix brachista
Sabra09G0047300 Salix brachista
Sabra16G0165100 Salix brachista
SalBow4G0699 Salvia bowleyana
Sc09g0000550 Simmondsia chinensis
Sc20g0007120 Simmondsia chinensis
Sed0001189 Sechium edule
Sed0010704 Sechium edule
SEGI_02845 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02254 Striga asiatica
SMO141G0024 Selaginella moellendorffii
Solyc09g009640.3 Solanum lycopersicum
Sopen09g004410 Solanum pennellii
Sp2g14670 Schrenkiella parvula
TAR369G0402 Trochodendron aralioides
TAR633G0908 Trochodendron aralioides
THA.LOC104809874 Tarenaya hassleriana
Thecc.01G413400 Theobroma cacao
Thhalv10005187m.g Eutrema salsugineum
TPR.G21719 Trifolium pratense
TWI14G0133 Tripterygium wilfordii
vmacro00152 Vaccinium macrocarpon
vmacro07761 Vaccinium macrocarpon
VMungo1127G1122 Vigna mungo
Zm00001eb069280 Zea mays
Zm00001eb431700 Zea mays

User provided reference genes

Program Settings