Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p14050 Brassica napus
A09p15170 Brassica napus
Aa31LG2G1060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1771 Anthoceros agrestis
Actinidia10607 Actinidia chinensis
Actinidia28347 Actinidia chinensis
Ah.07g196720 Amaranthus hybridus
Ah.12g051910 Amaranthus hybridus
AL2G11140 Arabidopsis lyrata
Aqoxy7G00203 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.072U0I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RG9U10 Arachis hypogaea
AT1G63970 Arabidopsis thaliana
ATR0661G112 Amborella trichopoda
Atru.chr9.2118 Acer truncatum
AUR62010748 Chenopodium quinoa
AUR62019751 Chenopodium quinoa
BcaB07g31421 Brassica carinata
BcaB07g31533 Brassica carinata
BcaC02g10359 Brassica carinata
BcaC04g22518 Brassica carinata
BcaC04g22662 Brassica carinata
BolC4t24512H Brassica oleracea
BolC4t24513H Brassica oleracea
BolC9t54591H Brassica oleracea
BolC9t54730H Brassica oleracea
BraA09t37052Z Brassica rapa
BraA09t37159Z Brassica rapa
C04p29780 Brassica napus
C04p29790 Brassica napus
C09p16940 Brassica napus
C09p18370 Brassica napus
CAN.G532.37 Capsicum annuum
CANSAT21G0568 Cannabis sativa
CARHR047010 Cardamine hirsuta
Carub.0002s0087 Capsella rubella
Ca_24538_v3 Cicer arietinum L.
CBR_g41628 Chara braunii
Cc08_g15230 Coffea canephora
CDE11G0665 Ceratophyllum demersum
Cfa012239 Carpinus fangiana
Cfa012242 Carpinus fangiana
Cfa012243 Carpinus fangiana
Ciclev10021991m.g Citrus clementina
CiPaw.11G130000 Carya illinoinensis
CiPaw.12G089400 Carya illinoinensis
ClCG07G007880 Citrullus lanatus
COL.COLO4_08364 Corchorus olitorius
Cpa.g.sc631.3 Carica papaya
Cre12.g503550 Chlamydomonas reinhardtii
CsaV3_4G006100 Cucumis sativus L.
CSS0017594 Camellia sinensis var. sinensis
CSS0021900 Camellia sinensis var. sinensis
DCAR_005572 Daucus carota
Dinv37598 Davidia involucrata
Duzib068G0196 Durio zibethinus
Duzib205G0943 Durio zibethinus
EL10Ac5g12833 Beta vulgaris
Eucgr.E00780 Eucalyptus grandis
Eucgr.L03318 Eucalyptus grandis
FAN04G1400 Fragaria x ananassa
FAN08G3453 Fragaria x ananassa
FAN13G1103 Fragaria x ananassa
FAN18G0698 Fragaria x ananassa
FvH4_5g03170 Fragaria vesca
Glyma.11G021400 Glycine max
Gohir.A02G105500 Gossypium hirsutum
Gohir.A08G114400 Gossypium hirsutum
Gohir.A08G114450 Gossypium hirsutum
Gohir.D03G078300 Gossypium hirsutum
Gohir.D08G134600 Gossypium hirsutum
Gorai.003G085800 Gossypium raimondii
Gorai.004G137800 Gossypium raimondii
GSVIVG01019415001 Vitis vinifera
HanXRQChr03g0085971 Helianthus annuus
Haze_08760 Corylus avellana
Haze_27119 Corylus avellana
Hma1.2p1_0377F.1_g139550 Hydrangea macrophylla
HPP92_025411 Vanilla planifolia
Hund11434 Selenicereus undatus
Lalb_Chr09g0320831 Lupinus albus
Lj2A178G47 Lonicera japonica
LjContig00312_ERROPOS870357g0014232 Lotus japonicus
Lsat_1_v5_gn_6_84980 Lactuca sativa
Manes.02G017610 Manihot esculenta
Mapoly0107s0035 Marchantia polymorpha
MCO02G159 Micromonas commoda
MD06G1090700 Malus domestica
MD06G1092700 Malus domestica
MD13G1222800 Malus domestica
MD14G1111600 Malus domestica
MD14G1120300 Malus domestica
Medtr5g010010 Medicago truncatula
MELO3C016339.2 Cucumis melo
Migut.A00721 Erythranthe guttata
MSTRG.11956 Avicennia marina
MSTRG.13860 Avicennia marina
Nitab4.5_0003015g0100 Nicotiana tabacum
Nitab4.5_0007906g0030 Nicotiana tabacum
Nn1g01669 Nelumbo nucifera
Oeu042360.2 Olea europaea
Os02g0680600 Oryza sativa ssp. japonica
Peaxi162Scf00074g01724 Petunia axillaris
PGR031G3114 Punica granatum
PGSC0003DMG400012185 Solanum tuberosum
Phvul.002G159900 Phaseolus vulgaris
Potri.001G099300 Populus trichocarpa
Potri.003G132400 Populus trichocarpa
Pp3c3_18960 Physcomitrium patens
PRCOL_00001316 Prasinoderma coloniale
Prupe.5G106300 Prunus persica
Psat2g183400 Pisum sativum
PSO478G4030 Papaver somniferum
PSO782G0193 Papaver somniferum
PSO782G4831 Papaver somniferum
QL12p031809 Quercus lobata
RcHm_v2.0_Chr7g0196611 Rosa chinensis
Rhsim02G0235500 Rhododendron simsii
Sabra01G0074500 Salix brachista
Sabra03G0094900 Salix brachista
SalBow8G4511 Salvia bowleyana
Sc01g0009830 Simmondsia chinensis
Sed0007168 Sechium edule
Sed0013368 Sechium edule
SEGI_11641 Sequoiadendron giganteum
SEGI_33828 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31472 Striga asiatica
SGA_v2.0_scaffold144G35903 Striga asiatica
SMO118G0129 Selaginella moellendorffii
Solyc08g081570.3 Solanum lycopersicum
Sopen08g029880 Solanum pennellii
Sp2g00720 Schrenkiella parvula
TAR629G0373 Trochodendron aralioides
TAR629G1542 Trochodendron aralioides
TAR636G2140 Trochodendron aralioides
THA.LOC104809368 Tarenaya hassleriana
THA.LOC104823600 Tarenaya hassleriana
Thecc.03G286300 Theobroma cacao
TPR.G6615 Trifolium pratense
TWI81G1086 Tripterygium wilfordii
unitig_37.g12237 Utricularia gibba
vmacro11408 Vaccinium macrocarpon
VMungo0251G1828 Vigna mungo
Zm00001eb187250 Zea mays
Zm00001eb250670 Zea mays

User provided reference genes

Program Settings