Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p33710 Brassica napus
Aa31LG1G19680 Aethionema arabicum
Aa31LG1G19690 Aethionema arabicum
Aa31LG1G19700 Aethionema arabicum
Aa31LG1G22940 Aethionema arabicum
Aa31LG1G22950 Aethionema arabicum
Aa31LG1G22960 Aethionema arabicum
Aa31LG1G22970 Aethionema arabicum
Aa31LG8G1910 Aethionema arabicum
Aa31sc1955G10 Aethionema arabicum
Aa31sc1955G20 Aethionema arabicum
Aa31sc2119G10 Aethionema arabicum
Aa31sc2673G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis
Actinidia11567 Actinidia chinensis
Actinidia29087 Actinidia chinensis
Ah.02g115540 Amaranthus hybridus
AL6G10830 Arabidopsis lyrata
Aqoxy4G02460 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea
AT5G01310 Arabidopsis thaliana
ATR0716G066 Amborella trichopoda
Atru.chr8.2282 Acer truncatum
AUR62030501 Chenopodium quinoa
AUR62030792 Chenopodium quinoa
BcaC06g31962 Brassica carinata
BcaC06g31973 Brassica carinata
BolC9t60195H Brassica oleracea
BraA10t45403Z Brassica rapa
C09p74610 Brassica napus
CAN.G41.5 Capsicum annuum
CANSAT35G1267 Cannabis sativa
CARHR211670 Cardamine hirsuta
Carub.0006s0050 Capsella rubella
Ca_06765_v3 Cicer arietinum L.
Ca_13410_v3 Cicer arietinum L.
Ca_13419_v3 Cicer arietinum L.
CBR_g45475 Chara braunii
Cc06_g01060 Coffea canephora
CDE08G0259 Ceratophyllum demersum
Cfa017171 Carpinus fangiana
Cfa025975 Carpinus fangiana
Ciclev10011130m.g Citrus clementina
CiPaw.10G158300 Carya illinoinensis
ClCG10G022350 Citrullus lanatus
COL.COLO4_14500 Corchorus olitorius
Cpa.g.sc120.24 Carica papaya
Cre02.g079150 Chlamydomonas reinhardtii
Cre05.g239450 Chlamydomonas reinhardtii
Cre06.g297904 Chlamydomonas reinhardtii
CsaV3_3G033540 Cucumis sativus L.
CSS0046053 Camellia sinensis var. sinensis
CSS0047541 Camellia sinensis var. sinensis
DCAR_006624 Daucus carota
Dinv13134 Davidia involucrata
Duzib093G1335 Durio zibethinus
Duzib128G0037 Durio zibethinus
ECA236G3605 Erigeron canadensis
EL10Ac5g12524 Beta vulgaris
Eucgr.A00552 Eucalyptus grandis
FAN02G3586 Fragaria x ananassa
FAN05G5223 Fragaria x ananassa
FAN09G0145 Fragaria x ananassa
FAN09G0802 Fragaria x ananassa
FAN09G1779 Fragaria x ananassa
FAN09G4669 Fragaria x ananassa
FAN14G3962 Fragaria x ananassa
FvH4_6g11090 Fragaria vesca
Glyma.01G117800 Glycine max
Glyma.U000401 Glycine max
Glyma.U000501 Glycine max
Gohir.A04G093700 Gossypium hirsutum
Gohir.D04G133000 Gossypium hirsutum
Gorai.012G116900 Gossypium raimondii
GSVIVG01003941001 Vitis vinifera
HanXRQChr12g0383191 Helianthus annuus
Haze_21033 Corylus avellana
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla
HPP92_025102 Vanilla planifolia
Hund10966 Selenicereus undatus
Hund10968 Selenicereus undatus
Lalb_Chr07g0191391 Lupinus albus
Lj2C71T3 Lonicera japonica
Lj5g0028092 Lotus japonicus
Lsat_1_v5_gn_8_100780 Lactuca sativa
Manes.09G106200 Manihot esculenta
Mapoly0120s0055 Marchantia polymorpha
MBI03_g18944_MAGBIO Magnolia biondii
MCO14G225 Micromonas commoda
MD04G1160300 Malus domestica
MD05G1095500 Malus domestica
MD12G1172800 Malus domestica
MD12G1173500 Malus domestica
Medtr1g024155 Medicago truncatula
Medtr1g024820 Medicago truncatula
Medtr8g092520 Medicago truncatula
MELO3C009144.2 Cucumis melo
Migut.J00131 Erythranthe guttata
MSTRG.18991 Avicennia marina
Nitab4.5_0000195g0210 Nicotiana tabacum
Nitab4.5_0012964g0020 Nicotiana tabacum
Nn2g10923 Nelumbo nucifera
Oeu033574.2 Olea europaea
Oeu063389.1 Olea europaea
Os03g0293400 Oryza sativa ssp. japonica
Peaxi162Scf01132g00134 Petunia axillaris
PGR031G0257 Punica granatum
PGSC0003DMG400006257 Solanum tuberosum
Phvul.010G073200 Phaseolus vulgaris
Potri.016G120200 Populus trichocarpa
Pp3c11_18160 Physcomitrium patens
Pp3c2_27000 Physcomitrium patens
Prupe.6G280900 Prunus persica
Psat6g003720 Pisum sativum
PSO339G4313 Papaver somniferum
PSO384G2802 Papaver somniferum
PSO675G8941 Papaver somniferum
QL08p015889 Quercus lobata
RcHm_v2.0_Chr3g0462501 Rosa chinensis
RcHm_v2.0_Chr3g0462521 Rosa chinensis
Rhsim05G0219600 Rhododendron simsii
Rhsim05G0219800 Rhododendron simsii
Sabra16G0116100 Salix brachista
SalBow5G0276 Salvia bowleyana
SalBow5G3519 Salvia bowleyana
Sc22g0002590 Simmondsia chinensis
Sed0022379 Sechium edule
SGA_v2.0_scaffold85G26714 Striga asiatica
SHI12858 Sapria himalayana
SHI12859 Sapria himalayana
SMO119G0484 Selaginella moellendorffii
Solyc09g005100.4 Solanum lycopersicum
Sopen09g001080 Solanum pennellii
Sp6g40630 Schrenkiella parvula
TAR633G0154 Trochodendron aralioides
THA.LOC104816650 Tarenaya hassleriana
Thecc.05G011500 Theobroma cacao
Thhalv10012562m.g Eutrema salsugineum
TPR.G34365 Trifolium pratense
TWI74G0571 Tripterygium wilfordii
unitig_27.g24848 Utricularia gibba
vmacro20302 Vaccinium macrocarpon
VMungo0331G1905 Vigna mungo
Zm00001eb013510 Zea mays

User provided reference genes

Program Settings