Gene: AT5G01310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G01310
  • Transcript Identifier AT5G01310.1
  • Gene Type Coding gene
  • Location Chr5 : 126329-128960 : positive

Gene Family Information

  • ID HOM05D005074
  • #Genes/#Species 147/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G01310.1
  • symbol APTX
  • full_name APRATAXIN-like
  • uniprot Q9M041

Descriptions

  • Description APRATAXIN-like protein
  • Computational description APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0000012
IBA
Gene Ontologysingle strand break repair1
GO:0006302
IBA
Gene Ontologydouble-strand break repair1
GO:0009150
IDA
Gene Ontologypurine ribonucleotide metabolic process2
GO:0006790
IDA
Gene Ontologysulfur compound metabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033699
IEA
GOA DatabaseDNA 5'-adenosine monophosphate hydrolase activity
GO:0033699
IBA
Gene OntologyDNA 5'-adenosine monophosphate hydrolase activity1
GO:0033699
IEA
InterProDNA 5'-adenosine monophosphate hydrolase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003697
IBA
Gene Ontologysingle-stranded DNA binding1
GO:0003725
IBA
Gene Ontologydouble-stranded RNA binding1
GO:0030983
IBA
Gene Ontologymismatched DNA binding1
GO:1990165
IBA
Gene Ontologysingle-strand break-containing DNA binding1
GO:0047627
IDA
Gene Ontologyadenylylsulfatase activity2
GO:0046983
IEA
Gene Ontologyprotein dimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR043472 Macro domain-like
IPR036265 HIT-like superfamily
IPR026963 Aprataxin-like
IPR002589 Macro domain
IPR032566 Aprataxin, C2HE/C2H2/C2HC zinc finger
Mapman id Description
35.1 not assigned.annotated