Gene: Thhalv10012562m.g
General Information
Structural Information
- Species Eutrema salsugineum
- Gene Identifier Thhalv10012562m.g
- Transcript Identifier Thhalv10012562m
- Gene Type Coding gene
- Location scaffold_2 : 267381-271348 : negative
Gene Family Information
- ID HOM05D005074
- #Genes/#Species 147/98
- Phylogenetic origin
- ID ORTHO05D006853
- #Genes/#Species 137/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Thhalv10012562m.g.v1.0
- pacid 20205799
Descriptions
- Description K10863 - aprataxin [EC:3.-.-.-] (APTX)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0009150 | ISO | PLAZA Integrative Orthology | purine ribonucleotide metabolic process | AT5G01310 |
| GO:0006790 | ISO | PLAZA Integrative Orthology | sulfur compound metabolic process | AT5G01310 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0033699 | IEA | InterPro | DNA 5'-adenosine monophosphate hydrolase activity | |
| GO:0047627 | ISO | PLAZA Integrative Orthology | adenylylsulfatase activity | AT5G01310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| IPR036638 | Helix-loop-helix DNA-binding domain superfamily |
| IPR043472 | Macro domain-like |
| IPR036265 | HIT-like superfamily |
| IPR002589 | Macro domain |
| IPR032566 | Aprataxin, C2HE/C2H2/C2HC zinc finger |
| IPR026963 | Aprataxin-like |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Mapman id | Description |
|---|---|
| 15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |