Gene: Pp3c11_18160

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c11_18160
  • Transcript Identifier Pp3c11_18160V3.1
  • Gene Type Coding gene
  • Location Chr11 : 12041469-12045571 : positive

Gene Family Information

  • ID HOM05D005074
  • #Genes/#Species 147/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c11_18160V3.1
  • pacid 32956215
  • alias Pp1s80_34V6
  • alias Phypa_130174
  • alias Phpat.011G065900
  • uniprot A0A2K1JV50

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006790
ISO
PLAZA Integrative Orthologysulfur compound metabolic process AT5G01310
GO:0009150
ISO
PLAZA Integrative Orthologypurine ribonucleotide metabolic process AT5G01310
GO:0000012
IBA
GOA Databasesingle strand break repair
GO:0006302
IBA
GOA Databasedouble-strand break repair
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003725
IBA
GOA Databasedouble-stranded RNA binding
GO:0047627
ISO
PLAZA Integrative Orthologyadenylylsulfatase activity AT5G01310
GO:0033699
IBA
IEA
GOA DatabaseDNA 5'-adenosine monophosphate hydrolase activity
GO:0033699
IEA
InterProDNA 5'-adenosine monophosphate hydrolase activity
GO:0030983
IBA
GOA Databasemismatched DNA binding
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:1990165
IBA
GOA Databasesingle-strand break-containing DNA binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043472 Macro domain-like
IPR036265 HIT-like superfamily
IPR019406 Aprataxin and PNK-like factor, PBZ domain
IPR032566 Aprataxin, C2HE/C2H2/C2HC zinc finger
IPR026963 Aprataxin-like
IPR002589 Macro domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated