Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17990 Brassica napus
Aa31LG5G5040 Aethionema arabicum
Actinidia11455 Actinidia chinensis
Actinidia11457 Actinidia chinensis
Actinidia28996 Actinidia chinensis
Ah.04g149400 Amaranthus hybridus
Ah.04g149410 Amaranthus hybridus
AL4G27320 Arabidopsis lyrata
AL80U10080 Arabidopsis lyrata
Aqoxy2G03932 Aquilegia oxysepala
Aqoxy430s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2Y4S4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KK4CMR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RK3EBX Arachis hypogaea
AT2G31970 Arabidopsis thaliana
ATR0561G148 Amborella trichopoda
Atru.chr4.1578 Acer truncatum
AUR62018556 Chenopodium quinoa
AUR62020862 Chenopodium quinoa
AUR62020863 Chenopodium quinoa
BcaB01g04004 Brassica carinata
BcaB01g04007 Brassica carinata
BcaB01g04008 Brassica carinata
BcaC01g05925 Brassica carinata
BcaC05g28670 Brassica carinata
BcaNung07125 Brassica carinata
BcaNung07126 Brassica carinata
BolC3t14484H Brassica oleracea
BraA03t11060Z Brassica rapa
C03p21030 Brassica napus
CAN.G765.38 Capsicum annuum
CARHR125720 Cardamine hirsuta
Carub.0004s1329 Capsella rubella
Ca_16406_v3 Cicer arietinum L.
Ca_16407_v3 Cicer arietinum L.
Ca_16414_v3 Cicer arietinum L.
Ca_16415_v3 Cicer arietinum L.
Ca_16416_v3 Cicer arietinum L.
CBR_g44539 Chara braunii
Cc03_g08470 Coffea canephora
CDE02G0777 Ceratophyllum demersum
Cfa014961 Carpinus fangiana
Cfa022909 Carpinus fangiana
Ciclev10004166m.g Citrus clementina
CiPaw.01G116800 Carya illinoinensis
ClCG05G003110 Citrullus lanatus
COL.COLO4_20231 Corchorus olitorius
COL.COLO4_20233 Corchorus olitorius
Cpa.g.sc157.48 Carica papaya
Cre03.g192550 Chlamydomonas reinhardtii
CsaV3_3G010730 Cucumis sativus L.
CSS0020032 Camellia sinensis var. sinensis
CSS0025820 Camellia sinensis var. sinensis
DCAR_005488 Daucus carota
Dinv38168 Davidia involucrata
Duzib151G0179 Durio zibethinus
ECA233G3942 Erigeron canadensis
ECA233G4939 Erigeron canadensis
ECA233G5354 Erigeron canadensis
EL10Ac3g07454 Beta vulgaris
Eucgr.H00025 Eucalyptus grandis
FAN07G1455 Fragaria x ananassa
FAN12G2321 Fragaria x ananassa
FAN17G1875 Fragaria x ananassa
FAN22G0494 Fragaria x ananassa
FvH4_4g13300 Fragaria vesca
Glyma.18G002400 Glycine max
Gohir.A02G019100 Gossypium hirsutum
Gohir.D02G022400 Gossypium hirsutum
Gorai.005G027800 Gossypium raimondii
HanXRQChr02g0058481 Helianthus annuus
Haze_11653 Corylus avellana
HPP92_024209 Vanilla planifolia
Lalb_Chr11g0075871 Lupinus albus
Lj6A381G12 Lonicera japonica
Lj6A381G13 Lonicera japonica
Lj6C381G5 Lonicera japonica
Lj6g0005100 Lotus japonicus
Lju912A1G33 Lonicera japonica
Lju912C0T2 Lonicera japonica
Lsat_1_v5_gn_2_13081 Lactuca sativa
Lsat_1_v5_gn_3_72140 Lactuca sativa
Lsat_1_v5_gn_5_127521 Lactuca sativa
Lsat_1_v5_gn_6_59140 Lactuca sativa
Manes.03G144200 Manihot esculenta
Mapoly0027s0186 Marchantia polymorpha
MBI07_g27365_MAGBIO Magnolia biondii
MBI07_g27366_MAGBIO Magnolia biondii
MBI07_g45033_MAGBIO Magnolia biondii
MCO01G132 Micromonas commoda
MD05G1230300 Malus domestica
Medtr3g084300 Medicago truncatula
MELO3C006292.2 Cucumis melo
Migut.G00767 Erythranthe guttata
MSTRG.9796 Avicennia marina
Nitab4.5_0002260g0080 Nicotiana tabacum
Nitab4.5_0003358g0080 Nicotiana tabacum
Nitab4.5_0003358g0090 Nicotiana tabacum
Nitab4.5_0003358g0100 Nicotiana tabacum
Nn3g20083 Nelumbo nucifera
Oeu034322.3 Olea europaea
Os02g0497500 Oryza sativa ssp. japonica
Peaxi162Scf00423g00410 Petunia axillaris
PGR142G0016 Punica granatum
Phvul.001G266800 Phaseolus vulgaris
Potri.001G320300 Populus trichocarpa
Pp3c10_3760 Physcomitrium patens
PRCOL_00000463 Prasinoderma coloniale
Prupe.1G165000 Prunus persica
Prupe.1G180400 Prunus persica
Psat5g100040 Pisum sativum
PSO017G0058 Papaver somniferum
QL06p025788 Quercus lobata
QL10p041126 Quercus lobata
RcHm_v2.0_Chr4g0413591 Rosa chinensis
Rhsim02G0061800 Rhododendron simsii
Rhsim02G0061900 Rhododendron simsii
Sabra16G0202900 Salix brachista
SalBow8G0828 Salvia bowleyana
Sc19g0007360 Simmondsia chinensis
Sed0026716 Sechium edule
SEGI_03121 Sequoiadendron giganteum
SEGI_03959 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11679 Striga asiatica
SHI26063 Sapria himalayana
SHI26066 Sapria himalayana
SHI26067 Sapria himalayana
SHI26068 Sapria himalayana
SHI26072 Sapria himalayana
SHI26076 Sapria himalayana
SMO217G0009 Selaginella moellendorffii
SMO356G0717 Selaginella moellendorffii
Solyc05g053800.3 Solanum lycopersicum
Sopen05g032270 Solanum pennellii
Sp4g14350 Schrenkiella parvula
TAR362G1154 Trochodendron aralioides
THA.LOC104826172 Tarenaya hassleriana
Thecc.04G195000 Theobroma cacao
Thhalv10016151m.g Eutrema salsugineum
TPR.G25379 Trifolium pratense
TWI53G1845 Tripterygium wilfordii
unitig_0.g1960 Utricularia gibba
unitig_0.g1961 Utricularia gibba
vmacro15566 Vaccinium macrocarpon
VMungo0251G0925 Vigna mungo
VMungo0331G0368 Vigna mungo
VMungo1383G3533 Vigna mungo
Zm00001eb181120 Zea mays

User provided reference genes

Program Settings