Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p55180 Brassica napus
Aa31LG5G9410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis
Actinidia02202 Actinidia chinensis
Actinidia27556 Actinidia chinensis
Actinidia30259 Actinidia chinensis
Actinidia39614 Actinidia chinensis
AL4G19270 Arabidopsis lyrata
Aqoxy6G02713 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.97VZCN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7JLU4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N970BB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9ATPP Arachis hypogaea
AT2G26460 Arabidopsis thaliana
ATR0681G246 Amborella trichopoda
Atru.chr7.1769 Acer truncatum
Atru.chr7.1770 Acer truncatum
AUR62000486 Chenopodium quinoa
AUR62006828 Chenopodium quinoa
BcaB08g35308 Brassica carinata
BcaB08g35309 Brassica carinata
BcaB08g35310 Brassica carinata
BcaB08g35311 Brassica carinata
BcaB08g35312 Brassica carinata
BcaB08g35313 Brassica carinata
BcaB08g35314 Brassica carinata
BcaB08g35315 Brassica carinata
BcaC07g40818 Brassica carinata
BolC8t51386H Brassica oleracea
BraA09t40926Z Brassica rapa
C08p38110 Brassica napus
CAN.G1728.2 Capsicum annuum
CAN.G457.2 Capsicum annuum
CAN.G457.3 Capsicum annuum
CANSAT56G1105 Cannabis sativa
CARHR114530 Cardamine hirsuta
Carub.0004s0646 Capsella rubella
Ca_02281_v3 Cicer arietinum L.
CBR_g41264 Chara braunii
Cc06_g12730 Coffea canephora
CDE05G0310 Ceratophyllum demersum
CDE05G0890 Ceratophyllum demersum
Cfa002936 Carpinus fangiana
Ciclev10007866m.g Citrus clementina
CiPaw.03G200100 Carya illinoinensis
ClCG10G017920 Citrullus lanatus
COL.COLO4_21204 Corchorus olitorius
Cpa.g.sc3709.1 Carica papaya
Cpa.g.sc82.61 Carica papaya
Cre16.g688750 Chlamydomonas reinhardtii
CsaV3_3G038370 Cucumis sativus L.
CSS0030162 Camellia sinensis var. sinensis
DCAR_024780 Daucus carota
Dinv32013 Davidia involucrata
Dinv44702 Davidia involucrata
Duzib168G0723 Durio zibethinus
Duzib187G1561 Durio zibethinus
ECA247G2383 Erigeron canadensis
EL10Ac4g09573 Beta vulgaris
Eucgr.C00765 Eucalyptus grandis
FAN19G2563 Fragaria x ananassa
FAN23G0125 Fragaria x ananassa
FAN26G0201 Fragaria x ananassa
FAN26G1404 Fragaria x ananassa
FAN28G2840 Fragaria x ananassa
FvH4_1g09440 Fragaria vesca
Glyma.09G074100 Glycine max
Glyma.15G183100 Glycine max
Gohir.A05G036200 Gossypium hirsutum
Gohir.D05G037700 Gossypium hirsutum
Gorai.009G038200 Gossypium raimondii
GSVIVG01015011001 Vitis vinifera
HanXRQChr12g0354251 Helianthus annuus
HanXRQChr12g0355141 Helianthus annuus
HanXRQChr12g0355211 Helianthus annuus
Haze_26072 Corylus avellana
HPP92_017869 Vanilla planifolia
Hund21824 Selenicereus undatus
Lalb_Chr08g0232851 Lupinus albus
Lj4A920T60 Lonicera japonica
Lj6g0010651 Lotus japonicus
Lsat_1_v5_gn_3_37601 Lactuca sativa
Lsat_1_v5_gn_5_138760 Lactuca sativa
Lsat_1_v5_gn_5_77280 Lactuca sativa
Lsat_1_v5_gn_5_77300 Lactuca sativa
Lsat_1_v5_gn_7_48580 Lactuca sativa
Lsat_1_v5_gn_7_48600 Lactuca sativa
Lsat_1_v5_gn_7_64781 Lactuca sativa
Manes.16G090200 Manihot esculenta
Mapoly0117s0005 Marchantia polymorpha
MBI19_g37995_MAGBIO Magnolia biondii
MCO14G054 Micromonas commoda
MD02G1102700 Malus domestica
MD15G1223900 Malus domestica
Medtr2g044200 Medicago truncatula
MELO3C009580.2 Cucumis melo
Migut.J00878 Erythranthe guttata
MSTRG.19426 Avicennia marina
Nitab4.5_0001114g0050 Nicotiana tabacum
Nitab4.5_0002665g0010 Nicotiana tabacum
Nn2g14232 Nelumbo nucifera
Nn7g37725 Nelumbo nucifera
Oeu000275.2 Olea europaea
Oeu041809.2 Olea europaea
Os11g0146700 Oryza sativa ssp. japonica
Os12g0143400 Oryza sativa ssp. japonica
Peaxi162Scf01184g10017 Petunia axillaris
PGR142G2122 Punica granatum
PGSC0003DMG401015931 Solanum tuberosum
Phvul.009G223400 Phaseolus vulgaris
Potri.018G064100 Populus trichocarpa
Pp3c19_4680 Physcomitrium patens
Prupe.7G191600 Prunus persica
Psat1g138640 Pisum sativum
PSO104G0255 Papaver somniferum
PSO421G0319 Papaver somniferum
PSO541G5242 Papaver somniferum
PSO832G3983 Papaver somniferum
QL05p089308 Quercus lobata
QL11p002992 Quercus lobata
RcHm_v2.0_Chr2g0095991 Rosa chinensis
Rhsim05G0001900 Rhododendron simsii
Rhsim09G0048200 Rhododendron simsii
Sabra18G0057000 Salix brachista
SalBow6G1194 Salvia bowleyana
Sc08g0005030 Simmondsia chinensis
Sed0019967 Sechium edule
SEGI_40202 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12698 Striga asiatica
SHI27983 Sapria himalayana
SMO266G0005 Selaginella moellendorffii
SMO270G0035 Selaginella moellendorffii
SMO270G0044 Selaginella moellendorffii
Solyc07g017490.3 Solanum lycopersicum
Sopen07g006280 Solanum pennellii
Sp4g07340 Schrenkiella parvula
TAR383G0334 Trochodendron aralioides
TAR626G1095 Trochodendron aralioides
THA.LOC104819454 Tarenaya hassleriana
Thecc.09G070000 Theobroma cacao
Thhalv10001246m.g Eutrema salsugineum
TPR.G21223 Trifolium pratense
TPR.G27074 Trifolium pratense
TWI32G0792 Tripterygium wilfordii
TWI34G1843 Tripterygium wilfordii
unitig_699.g19261 Utricularia gibba
vmacro03340 Vaccinium macrocarpon
vmacro12720 Vaccinium macrocarpon
vmacro17076 Vaccinium macrocarpon
VMungo1309G0172 Vigna mungo
Zm00001eb163350 Zea mays
Zm00001eb405000 Zea mays

User provided reference genes

Program Settings