Gene: Zm00001eb405000

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb405000
  • Transcript Identifier Zm00001eb405000_T001
  • Gene Type Coding gene
  • Location 10 : 1198153-1209223 : positive

Gene Family Information

  • ID HOM05D004857
  • #Genes/#Species 152/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb405000_T001
  • pid Zm00001eb405000_P001
  • uniprot K7VUK8
  • uniprot A0A3L6FII8
  • uniprot A0A3L6G9X7
  • uniprot A0A1D6NQ59
  • uniprot A0A3L6DTB0
  • uniprot A0A1D6NQ58
  • uniprot B6TZN1
  • uniprot A4L9Q6
  • entrez 100037818
  • refseq NM_001112518.1
  • refseq XM_008664137.1
  • refseq XP_008662359.1
  • refseq NP_001105988.1
  • V4_identifier Zm00001d023239

Descriptions

  • Description Zm00001e039187
  • Description Putative splicing factor
  • Description suppressors of mec-8 and unc-52 (C.elegans)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome
GO:0006412
IBA
IEA
GOA Databasetranslation
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT2G26460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0070180
IBA
GOA Databaselarge ribosomal subunit rRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G26460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005840
IEA
GOA Databaseribosome
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0015934
IBA
GOA Databaselarge ribosomal subunit
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT2G26460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012492 Protein RED, C-terminal
IPR012916 RED-like, N-terminal
IPR039896 Protein Red-like
Mapman id Description
16.2.6.10.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU2