Gene: Sopen07g006280
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g006280
- Transcript Identifier Sopen07g006280.1
- Gene Type Coding gene
- Location Spenn-ch07 : 7527313-7531363 : positive
Gene Family Information
- ID HOM05D004857
- #Genes/#Species 152/97
- Phylogenetic origin
- ID ORTHO05D005663
- #Genes/#Species 154/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen07g006280.1
Descriptions
- Description Encodes SMU2, a protein involved in RNA splicing. | SUPPRESSORS OF MEC-8 AND UNC-52 2 (SMU2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: RNA splicing | LOCATED IN: nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: RED-like, N-terminal , RED-like, C-terminal
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT2G26460 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G26460 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G26460 |
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT2G26460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.6.10.2 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU2 |