Gene: vmacro03340

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro03340
  • Transcript Identifier vmacro03340-RA
  • Gene Type Coding gene
  • Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 13186583-13194399 : negative

Gene Family Information

  • ID HOM05D004857
  • #Genes/#Species 152/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro03340_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to SMU2: Suppressor of mec-8 and unc-52 protein homolog 2 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT2G26460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G26460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G26460
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT2G26460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR012492 Protein RED, C-terminal
IPR039896 Protein Red-like
IPR012916 RED-like, N-terminal
Mapman id Description
16.2.6.10.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU2