Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p46930 Brassica napus
Aa31LG9G8420 Aethionema arabicum
Aa31LG9G8850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1916 Anthoceros agrestis
Actinidia05501 Actinidia chinensis
Actinidia06408 Actinidia chinensis
Actinidia06409 Actinidia chinensis
Actinidia06411 Actinidia chinensis
Actinidia10456 Actinidia chinensis
Actinidia17891 Actinidia chinensis
Actinidia17896 Actinidia chinensis
Actinidia27624 Actinidia chinensis
Actinidia29927 Actinidia chinensis
Ah.01g018340 Amaranthus hybridus
Ah.08g217520 Amaranthus hybridus
AL8G14780 Arabidopsis lyrata
Aqoxy6G02842 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9X93LG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6JX6R Arachis hypogaea
AT5G44750 Arabidopsis thaliana
ATR0205G027 Amborella trichopoda
Atru.chr3.2810 Acer truncatum
Atru.chr5.2475 Acer truncatum
AUR62010324 Chenopodium quinoa
AUR62039064 Chenopodium quinoa
BcaNung06822 Brassica carinata
BcaNung07102 Brassica carinata
BolC7t43304H Brassica oleracea
BraA06t27566Z Brassica rapa
C07p27720 Brassica napus
CAN.G606.12 Capsicum annuum
CAN.G606.8 Capsicum annuum
CANSAT25G3392 Cannabis sativa
CARHR178150 Cardamine hirsuta
Carub.0008s0351 Capsella rubella
Ca_24346_v3 Cicer arietinum L.
Ca_29336_v3 Cicer arietinum L.
CBR_g29912 Chara braunii
CBR_g29914 Chara braunii
CBR_g29916 Chara braunii
Cc02_g19340 Coffea canephora
CDE01G0038 Ceratophyllum demersum
CDE02G3140 Ceratophyllum demersum
Cfa025442 Carpinus fangiana
Ciclev10027730m.g Citrus clementina
CiPaw.05G012900 Carya illinoinensis
ClCG02G006490 Citrullus lanatus
COL.COLO4_32578 Corchorus olitorius
Cpa.g.sc106.104 Carica papaya
Cpa.g.sc106.105 Carica papaya
Cpa.g.sc106.106 Carica papaya
Cre12.g550800 Chlamydomonas reinhardtii
CsaV3_7G008100 Cucumis sativus L.
CSS0042044 Camellia sinensis var. sinensis
DCAR_029088 Daucus carota
Dinv42201 Davidia involucrata
Duzib205G0175 Durio zibethinus
ECA236G4936 Erigeron canadensis
EL10Ac4g08553 Beta vulgaris
EL10Ac9g20660 Beta vulgaris
EL10Ac9g22261 Beta vulgaris
EL10As9g23934 Beta vulgaris
Eucgr.I01096 Eucalyptus grandis
FAN08G0567 Fragaria x ananassa
FAN15G1156 Fragaria x ananassa
FAN17G1969 Fragaria x ananassa
FvH4_1g23540 Fragaria vesca
FvH4_2g04972 Fragaria vesca
FvH4_4g00090 Fragaria vesca
Glyma.01G243900 Glycine max
Gohir.A13G044100 Gossypium hirsutum
Gohir.D13G043200 Gossypium hirsutum
Gorai.013G047900 Gossypium raimondii
GSVIVG01037905001 Vitis vinifera
HanXRQChr17g0570571 Helianthus annuus
Hma1.2p1_2341F.1_g320320 Hydrangea macrophylla
Hma1.2p1_2341F.1_g320330 Hydrangea macrophylla
HPP92_016994 Vanilla planifolia
HPP92_017010 Vanilla planifolia
HPP92_017011 Vanilla planifolia
HPP92_017090 Vanilla planifolia
Hund06310 Selenicereus undatus
Lalb_Chr09g0319571 Lupinus albus
Lalb_Chr09g0319581 Lupinus albus
Lj1g0003104 Lotus japonicus
Lj5A215G62 Lonicera japonica
Lsat_1_v5_gn_7_85781 Lactuca sativa
Manes.07G069666 Manihot esculenta
Mapoly0216s0004 Marchantia polymorpha
MBI16_g23720_MAGBIO Magnolia biondii
MCO11G117 Micromonas commoda
MCO11G654 Micromonas commoda
MD05G1091100 Malus domestica
MD10G1098400 Malus domestica
Medtr5g004960 Medicago truncatula
MELO3C005497.2 Cucumis melo
Migut.N01158 Erythranthe guttata
Migut.O00601 Erythranthe guttata
Nitab4.5_0001143g0010 Nicotiana tabacum
Nitab4.5_0004326g0020 Nicotiana tabacum
Nn1g04670 Nelumbo nucifera
Oeu044275.2 Olea europaea
Os06g0691000 Oryza sativa ssp. japonica
Peaxi162Scf00016g02441 Petunia axillaris
PGR142G1976 Punica granatum
PGSC0003DMG403025764 Solanum tuberosum
Phvul.002G053200 Phaseolus vulgaris
Phvul.002G053400 Phaseolus vulgaris
Potri.009G094400 Populus trichocarpa
Pp3c22_4740 Physcomitrium patens
PRCOL_00001737 Prasinoderma coloniale
Prupe.8G136700 Prunus persica
Psat4g228520 Pisum sativum
PSO541G3304 Papaver somniferum
QL11p033063 Quercus lobata
RcHm_v2.0_Chr1g0332621 Rosa chinensis
RcHm_v2.0_Chr2g0113681 Rosa chinensis
RcHm_v2.0_Chr4g0405101 Rosa chinensis
RcHm_v2.0_Chr4g0432031 Rosa chinensis
RcHm_v2.0_Chr6g0254741 Rosa chinensis
Rhsim05G0088800 Rhododendron simsii
Rhsim05G0088900 Rhododendron simsii
Rhsim05G0099800 Rhododendron simsii
Rhsim05G0099900 Rhododendron simsii
Rhsim05G0100000 Rhododendron simsii
Sabra09G0072700 Salix brachista
SalBow3G4263 Salvia bowleyana
Sc18g0005570 Simmondsia chinensis
Sed0001586 Sechium edule
SEGI_12594 Sequoiadendron giganteum
SEGI_21122 Sequoiadendron giganteum
SEGI_39660 Sequoiadendron giganteum
SEGI_40020 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30732 Striga asiatica
SMO235G0070 Selaginella moellendorffii
SMO347G0466 Selaginella moellendorffii
Solyc01g107510.3 Solanum lycopersicum
Sopen01g049730 Solanum pennellii
Sp2g09590 Schrenkiella parvula
TAR371G0276 Trochodendron aralioides
TAR376G0480 Trochodendron aralioides
TAR376G1059 Trochodendron aralioides
TAR511G0004 Trochodendron aralioides
THA.LOC104812918 Tarenaya hassleriana
Thecc.02G110100 Theobroma cacao
Thhalv10000766m.g Eutrema salsugineum
TPR.G21613 Trifolium pratense
TWI79G0830 Tripterygium wilfordii
unitig_26.g10234 Utricularia gibba
vmacro19454 Vaccinium macrocarpon
VMungo1309G1067 Vigna mungo
Zm00001eb226110 Zea mays

User provided reference genes

Program Settings