Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p60970 Brassica napus
A08p18460 Brassica napus
Aa31LG2G18560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.559 Anthoceros agrestis
Actinidia10255 Actinidia chinensis
Ah.04g152730 Amaranthus hybridus
AL7G20240 Arabidopsis lyrata
Aqoxy1G00870 Aquilegia oxysepala
Aqoxy4G02579 Aquilegia oxysepala
Aqoxy5G01951 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68HE9A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HM8GSV Arachis hypogaea
AT4G31770 Arabidopsis thaliana
ATR0582G232 Amborella trichopoda
ATR0767G225 Amborella trichopoda
Atru.BG.288.p Acer truncatum
Atru.chr7.2571 Acer truncatum
AUR62033828 Chenopodium quinoa
AUR62035754 Chenopodium quinoa
BcaB02g11404 Brassica carinata
BcaB03g12718 Brassica carinata
BcaC01g01061 Brassica carinata
BcaNung01500 Brassica carinata
BcaNung01502 Brassica carinata
BcaNung04120 Brassica carinata
BolC3t21075H Brassica oleracea
BolC7t46334H Brassica oleracea
BraA03t15138Z Brassica rapa
BraA08t33808Z Brassica rapa
C03p87550 Brassica napus
C07p58870 Brassica napus
CAN.G1057.23 Capsicum annuum
CAN.G673.1 Capsicum annuum
CARHR239670 Cardamine hirsuta
Carub.0007s0879 Capsella rubella
Ca_15788_v3 Cicer arietinum L.
CBR_g10907 Chara braunii
Cc00_g23510 Coffea canephora
CDE06G0415 Ceratophyllum demersum
Cfa013018 Carpinus fangiana
Cfa025655 Carpinus fangiana
CiPaw.07G232700 Carya illinoinensis
ClCG08G013810 Citrullus lanatus
COL.COLO4_18967 Corchorus olitorius
Cpa.g.sc40.1 Carica papaya
Cre02.g146950 Chlamydomonas reinhardtii
CsaV3_2G032600 Cucumis sativus L.
CSS0005545 Camellia sinensis var. sinensis
CSS0024103 Camellia sinensis var. sinensis
DCAR_020033 Daucus carota
Dinv22023 Davidia involucrata
Dinv44899 Davidia involucrata
Dinv44900 Davidia involucrata
Duzib168G2074 Durio zibethinus
ECA246G1320 Erigeron canadensis
EL10Ac1g02297 Beta vulgaris
Eucgr.C04030 Eucalyptus grandis
FAN14G3005 Fragaria x ananassa
FAN15G2922 Fragaria x ananassa
FvH4_2g41360 Fragaria vesca
FvH4_6g29560 Fragaria vesca
Glyma.04G059700 Glycine max
Gohir.1Z049306 Gossypium hirsutum
Gohir.1Z049408 Gossypium hirsutum
Gohir.1Z049424 Gossypium hirsutum
Gohir.1Z049489 Gossypium hirsutum
Gohir.1Z049533 Gossypium hirsutum
Gohir.1Z049565 Gossypium hirsutum
Gohir.A02G000050 Gossypium hirsutum
Gohir.A02G000200 Gossypium hirsutum
Gohir.A03G000001 Gossypium hirsutum
Gohir.A03G000005 Gossypium hirsutum
Gohir.A04G148266 Gossypium hirsutum
Gohir.A05G415901 Gossypium hirsutum
Gohir.A07G000083 Gossypium hirsutum
Gohir.A07G233600 Gossypium hirsutum
Gohir.A08G000024 Gossypium hirsutum
Gohir.A09G249600 Gossypium hirsutum
Gohir.A11G330400 Gossypium hirsutum
Gohir.A12G000500 Gossypium hirsutum
Gohir.A12G001050 Gossypium hirsutum
Gohir.A12G001100 Gossypium hirsutum
Gohir.A13G000601 Gossypium hirsutum
Gohir.A13G000900 Gossypium hirsutum
Gohir.D03G178375 Gossypium hirsutum
Gohir.D11G176300 Gossypium hirsutum
Gohir.D12G000832 Gossypium hirsutum
GSVIVG01009251001 Vitis vinifera
HanXRQChr10g0277671 Helianthus annuus
Haze_27111 Corylus avellana
HPP92_007721 Vanilla planifolia
Hund05236 Selenicereus undatus
Lalb_Chr08g0244491 Lupinus albus
Lj1g0020479 Lotus japonicus
Lj4A81G69 Lonicera japonica
Lsat_1_v5_gn_4_135621 Lactuca sativa
Lsat_1_v5_gn_6_106561 Lactuca sativa
Manes.03G006700 Manihot esculenta
Mapoly0014s0124 Marchantia polymorpha
MBI16_g14670_MAGBIO Magnolia biondii
MCO02G476 Micromonas commoda
MD08G1051300 Malus domestica
MD13G1228500 Malus domestica
MD15G1043800 Malus domestica
Medtr3g105810 Medicago truncatula
MELO3C011313.2 Cucumis melo
Migut.K00575 Erythranthe guttata
MSTRG.20476 Avicennia marina
Nitab4.5_0000159g0030 Nicotiana tabacum
Nitab4.5_0006397g0010 Nicotiana tabacum
Nn8g39668 Nelumbo nucifera
Oeu016078.1 Olea europaea
Os03g0725300 Oryza sativa ssp. japonica
Peaxi162Scf00005g04810 Petunia axillaris
PGSC0003DMG400002300 Solanum tuberosum
Phvul.009G085900 Phaseolus vulgaris
Potri.018G015300 Populus trichocarpa
Pp3c24_19510 Physcomitrium patens
PRCOL_00004462 Prasinoderma coloniale
Prupe.1G397300 Prunus persica
Psat5g034520 Pisum sativum
PSO210G0837 Papaver somniferum
PSO210G2241 Papaver somniferum
PSO761G0470 Papaver somniferum
QL02p018098 Quercus lobata
RcHm_v2.0_Chr1g0357361 Rosa chinensis
RcHm_v2.0_Chr2g0135121 Rosa chinensis
RcHm_v2.0_Chr6g0299131 Rosa chinensis
Rhsim06G0068400 Rhododendron simsii
Sabra18G0018800 Salix brachista
SalBow7G0863 Salvia bowleyana
SalBow7G1987 Salvia bowleyana
SalBow7G3287 Salvia bowleyana
Sc02g0008350 Simmondsia chinensis
Sed0002897 Sechium edule
SEGI_18909 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10244 Striga asiatica
SGA_v2.0_scaffold443G51691 Striga asiatica
SGA_v2.0_scaffold48G18066 Striga asiatica
SMO145G0212 Selaginella moellendorffii
SMO284G0001 Selaginella moellendorffii
Solyc07g017640.2 Solanum lycopersicum
Sopen07g006070 Solanum pennellii
Sopen07g006470 Solanum pennellii
Sp7g29560 Schrenkiella parvula
TAR625G0772 Trochodendron aralioides
THA.LOC104803607 Tarenaya hassleriana
Thecc.09G013800 Theobroma cacao
Thhalv10025305m.g Eutrema salsugineum
TPR.G1862 Trifolium pratense
TWI32G1217 Tripterygium wilfordii
unitig_744.g24377 Utricularia gibba
vmacro21376 Vaccinium macrocarpon
VMungo1309G1293 Vigna mungo
Zm00001eb215780 Zea mays

User provided reference genes

Program Settings