Gene: Lsat_1_v5_gn_4_135621

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_135621
  • Transcript Identifier Lsat_1_v5_gn_4_135621.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 254728341-254730300 : negative

Gene Family Information

  • ID HOM05D004741
  • #Genes/#Species 155/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_135621.v5
  • pacid 38932835

Descriptions

  • Description K18328 - lariat debranching enzyme [EC:3.1.-.-] (DBR1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G31770

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016788
IEA
InterProhydrolase activity, acting on ester bonds
GO:0016787
IEA
InterProhydrolase activity
GO:0008419
ISO
PLAZA Integrative OrthologyRNA lariat debranching enzyme activity AT4G31770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007708 Lariat debranching enzyme, C-terminal
IPR029052 Metallo-dependent phosphatase-like
IPR041816 Lariat debranching enzyme, N-terminal metallophosphatase domain
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
Mapman id Description
16.2.8.1 RNA processing.pre-mRNA splicing.intron-lariat-RNA degrading.intron-lariat-RNA degrading enzyme (DBR1)