Gene: Zm00001eb215780

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb215780
  • Transcript Identifier Zm00001eb215780_T001
  • Gene Type Coding gene
  • Location 5 : 10155495-10159065 : negative

Gene Family Information

  • ID HOM05D004741
  • #Genes/#Species 155/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb215780_T001
  • pid Zm00001eb215780_P001
  • uniprot A0A1D6GII3
  • uniprot B6U6X4
  • uniprot A0A1D6GII4
  • uniprot A0A3L6EN04
  • uniprot A0A1D6GII6
  • uniprot A0A1D6GII7
  • uniprot A0A1D6GII8
  • entrez 100285583
  • refseq NM_001158474.1
  • refseq NP_001151946.1
  • V4_identifier Zm00001d013375

Descriptions

  • Description Zm00001e012125
  • Description Lariat debranching enzyme
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome
GO:0009793
IEA
GOA Databaseembryo development ending in seed dormancy

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008419
IBA
IEA
GOA DatabaseRNA lariat debranching enzyme activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0016788
IEA
GOA Databasehydrolase activity, acting on ester bonds
GO:0016788
IEA
InterProhydrolase activity, acting on ester bonds
GO:0005524
IEA
GOA DatabaseATP binding
GO:0004672
IEA
GOA Databaseprotein kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041816 Lariat debranching enzyme, N-terminal metallophosphatase domain
IPR029052 Metallo-dependent phosphatase-like
IPR007708 Lariat debranching enzyme, C-terminal
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
Mapman id Description
16.2.8.1 RNA processing.pre-mRNA splicing.intron-lariat-RNA degrading.intron-lariat-RNA degrading enzyme (DBR1)