Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p31560 Brassica napus
Aa31LG7G190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5273 Anthoceros agrestis
Actinidia01772 Actinidia chinensis
Actinidia15802 Actinidia chinensis
Actinidia15803 Actinidia chinensis
Ah.08g209920 Amaranthus hybridus
AL1G27560 Arabidopsis lyrata
Aqoxy7G02078 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DS860L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4R828 Arachis hypogaea
AT1G15440 Arabidopsis thaliana
ATR0705G066 Amborella trichopoda
Atru.chr1.3106 Acer truncatum
Atru.chr1.3112 Acer truncatum
AUR62011570 Chenopodium quinoa
AUR62016387 Chenopodium quinoa
BcaB03g13059 Brassica carinata
BcaC07g38791 Brassica carinata
BolC5t30098H Brassica oleracea
BolC8t49350H Brassica oleracea
BraA08t35078Z Brassica rapa
C05p13620 Brassica napus
C08p17210 Brassica napus
CAN.G438.78 Capsicum annuum
CANSAT56G1977 Cannabis sativa
CARHR016000 Cardamine hirsuta
Carub.0001s1524 Capsella rubella
Ca_02514_v3 Cicer arietinum L.
CBR_g51007 Chara braunii
Cc04_g03970 Coffea canephora
CDE02G1289 Ceratophyllum demersum
CDE04G1486 Ceratophyllum demersum
Cfa002013 Carpinus fangiana
Cfa003083 Carpinus fangiana
Cfa022012 Carpinus fangiana
Ciclev10024861m.g Citrus clementina
CiPaw.02G154600 Carya illinoinensis
ClCG06G013830 Citrullus lanatus
ClCG07G012820 Citrullus lanatus
COL.COLO4_12887 Corchorus olitorius
Cpa.g.sc10.221 Carica papaya
Cre06.g254150 Chlamydomonas reinhardtii
Cre08.g382620 Chlamydomonas reinhardtii
CsaV3_4G001370 Cucumis sativus L.
CSS0009653 Camellia sinensis var. sinensis
DCAR_000230 Daucus carota
Dinv30566 Davidia involucrata
Duzib192G0063 Durio zibethinus
ECA038G0001 Erigeron canadensis
ECA247G0606 Erigeron canadensis
ECA247G1145 Erigeron canadensis
ECA247G2328 Erigeron canadensis
ECA247G3964 Erigeron canadensis
EL10Ac9g21952 Beta vulgaris
Eucgr.J03040 Eucalyptus grandis
FAN02G3057 Fragaria x ananassa
FAN05G0230 Fragaria x ananassa
FAN09G0300 Fragaria x ananassa
FAN09G4623 Fragaria x ananassa
FAN14G3011 Fragaria x ananassa
FAN26G1001 Fragaria x ananassa
FvH4_6g30400 Fragaria vesca
Glyma.09G084600 Glycine max
Glyma.15G193000 Glycine max
Gohir.A09G084900 Gossypium hirsutum
Gohir.D09G084800 Gossypium hirsutum
Gorai.006G100800 Gossypium raimondii
GSVIVG01017243001 Vitis vinifera
HanXRQChr04g0096711 Helianthus annuus
HanXRQChr04g0097171 Helianthus annuus
HanXRQChr04g0097231 Helianthus annuus
HanXRQChr04g0097241 Helianthus annuus
HanXRQChr14g0426971 Helianthus annuus
Haze_16509 Corylus avellana
HPP92_024437 Vanilla planifolia
HPP92_024438 Vanilla planifolia
Hund06583 Selenicereus undatus
Lalb_Chr11g0073441 Lupinus albus
Lj5A68G59 Lonicera japonica
LjContig00155g0017542 Lotus japonicus
Lsat_1_v5_gn_1_33541 Lactuca sativa
Manes.04G117100 Manihot esculenta
Manes.11G052400 Manihot esculenta
Mapoly0001s0129 Marchantia polymorpha
MBI04_g45208_MAGBIO Magnolia biondii
MCO13G139 Micromonas commoda
MCO13G313 Micromonas commoda
MD06G1214300 Malus domestica
MD09G1221400 Malus domestica
MD09G1221500 Malus domestica
MD17G1203900 Malus domestica
Medtr7g076230 Medicago truncatula
MELO3C017903.2 Cucumis melo
Migut.I00803 Erythranthe guttata
MSTRG.22725 Avicennia marina
Nitab4.5_0000671g0170 Nicotiana tabacum
Nitab4.5_0023790g0010 Nicotiana tabacum
Nn8g39375 Nelumbo nucifera
Oeu033101.1 Olea europaea
Oeu052287.2 Olea europaea
Os05g0519500 Oryza sativa ssp. japonica
Peaxi162Scf00015g00456 Petunia axillaris
PGR031G2027 Punica granatum
PGSC0003DMG400005691 Solanum tuberosum
Phvul.009G217600 Phaseolus vulgaris
Potri.001G173500 Populus trichocarpa
Potri.003G060500 Populus trichocarpa
Pp3c11_15250 Physcomitrium patens
Pp3c7_9990 Physcomitrium patens
PRCOL_00000917 Prasinoderma coloniale
PRCOL_00007011 Prasinoderma coloniale
Prupe.3G078900 Prunus persica
Psat0s4195g0120 Pisum sativum
Psat3g100960 Pisum sativum
Psat4g082440 Pisum sativum
PSO541G6522 Papaver somniferum
PSO675G6139 Papaver somniferum
PSO832G2238 Papaver somniferum
PSO832G4299 Papaver somniferum
QL05p027590 Quercus lobata
RcHm_v2.0_Chr2g0136751 Rosa chinensis
Rhsim08G0216600 Rhododendron simsii
Sabra01G0138300 Salix brachista
SalBow2G0244 Salvia bowleyana
Sc12g0008880 Simmondsia chinensis
Sed0001284 Sechium edule
Sed0010016 Sechium edule
Sed0020458 Sechium edule
Sed0027531 Sechium edule
SEGI_00336 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02661 Striga asiatica
SMO174G0024 Selaginella moellendorffii
SMO336G0019 Selaginella moellendorffii
SMO336G0033 Selaginella moellendorffii
SMO337G0040 Selaginella moellendorffii
SMO337G0094 Selaginella moellendorffii
SMO347G0477 Selaginella moellendorffii
SMO353G0051 Selaginella moellendorffii
SMO356G0696 Selaginella moellendorffii
Solyc03g120080.4 Solanum lycopersicum
Sopen03g038950 Solanum pennellii
Sp1g13810 Schrenkiella parvula
TAR627G0037 Trochodendron aralioides
TAR627G0283 Trochodendron aralioides
TAR627G0296 Trochodendron aralioides
TAR636G0609 Trochodendron aralioides
THA.LOC104812492 Tarenaya hassleriana
Thecc.06G074100 Theobroma cacao
Thhalv10006752m.g Eutrema salsugineum
TPR.G37778 Trifolium pratense
TWI12G0769 Tripterygium wilfordii
unitig_0.g1124 Utricularia gibba
vmacro18956 Vaccinium macrocarpon
VMungo1309G3168 Vigna mungo
Zm00001eb293800 Zea mays

User provided reference genes

Program Settings