Gene: Solyc03g120080.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g120080.4
  • Transcript Identifier Solyc03g120080.4.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 63017838-63023073 : positive

Gene Family Information

  • ID HOM05D004669
  • #Genes/#Species 156/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g120080.4.1
  • uniprot A0A3Q7FVB4
  • gene_id Solyc03g120080

Descriptions

  • Description periodic tryptophan protein 2 homolog (AHRD V3.3 *** A0A2I4EVX9_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000028
IBA
GOA Databaseribosomal small subunit assembly
GO:0000462
IBA
GOA Databasematuration of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0010119
ISO
PLAZA Integrative Orthologyregulation of stomatal movement AT1G15440
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT1G15440
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT1G15440
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose AT1G15440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0034388
IBA
GOA DatabasePwp2p-containing subcomplex of 90S preribosome
GO:0032040
IBA
GOA Databasesmall-subunit processome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G15440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR027145 Periodic tryptophan protein 2
IPR007148 Small-subunit processome, Utp12
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR011044 Quinoprotein amine dehydrogenase, beta chain-like
Mapman id Description
17.1.3.2.1.3.5 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (PWP2/UTP1)