Gene: Cc04_g03970
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc04_g03970
- Transcript Identifier Cc04_g03970.1
- Gene Type Coding gene
- Location chr4 : 3013956-3018315 : positive
Gene Family Information
- ID HOM05D004669
- #Genes/#Species 156/98
- Phylogenetic origin
- ID ORTHO05D005767
- #Genes/#Species 152/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB Q15269
- UniProtKB A5BLN0
- UniProtKB Q5RFQ3
- UniProtKB E6NUE1
- UniProtKB Q8BU03
- UniProtKB B9GWE4
- id GSCOCG00022113001
Descriptions
- Description Putative Periodic tryptophan protein 2 homolog
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010119 | ISO | PLAZA Integrative Orthology | regulation of stomatal movement | AT1G15440 |
| GO:0006364 | ISO | PLAZA Integrative Orthology | rRNA processing | AT1G15440 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G15440 |
| GO:0009744 | ISO | PLAZA Integrative Orthology | response to sucrose | AT1G15440 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G15440 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G15440 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR027145 | Periodic tryptophan protein 2 |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR007148 | Small-subunit processome, Utp12 |
| Mapman id | Description |
|---|---|
| 17.1.3.2.1.3.5 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (PWP2/UTP1) |