Gene: COL.COLO4_12887

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_12887
  • Transcript Identifier COL.rna11676
  • Gene Type Coding gene
  • Location AWUE01014978.1 : 59382-63428 : positive

Gene Family Information

  • ID HOM05D004669
  • #Genes/#Species 156/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna11676
  • GenBank OMP00146.1
  • id gene12859
  • gene_name COLO4_12887
  • uniprot A0A1R3JZC7

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010119
ISO
PLAZA Integrative Orthologyregulation of stomatal movement AT1G15440
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT1G15440
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT1G15440
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose AT1G15440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G15440
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G15440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR027145 Periodic tryptophan protein 2
Mapman id Description
17.1.3.2.1.3.5 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (PWP2/UTP1)