Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p25430 Brassica napus
Aa31LG6G11170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2257 Anthoceros agrestis
Actinidia04550 Actinidia chinensis
Actinidia19274 Actinidia chinensis
Actinidia28954 Actinidia chinensis
AL1G42190 Arabidopsis lyrata
AL6G30620 Arabidopsis lyrata
Aqoxy1G03234 Aquilegia oxysepala
Aqoxy1G03457 Aquilegia oxysepala
Aqoxy5G01821 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3Z2F0I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6YF458 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U25ASJ Arachis hypogaea
AT1G28560 Arabidopsis thaliana
ATR0751G025 Amborella trichopoda
ATR0751G240 Amborella trichopoda
Atru.chr1.2210 Acer truncatum
AUR62005705 Chenopodium quinoa
AUR62028851 Chenopodium quinoa
BcaB03g12095 Brassica carinata
BcaC01g00070 Brassica carinata
BolC3t19796H Brassica oleracea
BraA08t34494Z Brassica rapa
C03p75380 Brassica napus
CAN.G413.16 Capsicum annuum
CAN.G567.108 Capsicum annuum
CANSAT64G2239 Cannabis sativa
CARHR028060 Cardamine hirsuta
Carub.0001s2702 Capsella rubella
Carub.0004s0328 Capsella rubella
Ca_04223_v3 Cicer arietinum L.
Cc07_g14170 Coffea canephora
Cc07_g14650 Coffea canephora
Cc09_g09380 Coffea canephora
Cc09_g09390 Coffea canephora
CDE04G0808 Ceratophyllum demersum
Cfa002678 Carpinus fangiana
Ciclev10015263m.g Citrus clementina
CiPaw.05G165700 Carya illinoinensis
CiPaw.09G112800 Carya illinoinensis
CiPaw.09G112900 Carya illinoinensis
ClCG01G009110 Citrullus lanatus
COL.COLO4_20401 Corchorus olitorius
Cpa.g.sc27.187 Carica papaya
Cre15.g636650 Chlamydomonas reinhardtii
CsaV3_1G046480 Cucumis sativus L.
CSS0001318 Camellia sinensis var. sinensis
CSS0003336 Camellia sinensis var. sinensis
CSS0008447 Camellia sinensis var. sinensis
DCAR_024762 Daucus carota
DCAR_028981 Daucus carota
DCAR_031515 Daucus carota
Dinv01695 Davidia involucrata
Dinv11048 Davidia involucrata
Duzib251G0924 Durio zibethinus
Duzib251G0925 Durio zibethinus
Duzib268G1219 Durio zibethinus
ECA237G0001 Erigeron canadensis
ECA237G0002 Erigeron canadensis
ECA238G0224 Erigeron canadensis
ECA238G2574 Erigeron canadensis
ECA238G4413 Erigeron canadensis
ECA247G2196 Erigeron canadensis
EL10Ac3g07399 Beta vulgaris
Eucgr.D00971 Eucalyptus grandis
FAN02G1202 Fragaria x ananassa
FAN05G0490 Fragaria x ananassa
FAN14G0080 Fragaria x ananassa
FAN18G1652 Fragaria x ananassa
FAN18G2840 Fragaria x ananassa
FvH4_6g39210 Fragaria vesca
Glyma.07G270100 Glycine max
Gohir.A05G310600 Gossypium hirsutum
Gohir.D05G311400 Gossypium hirsutum
Gorai.009G332500 Gossypium raimondii
GSVIVG01002826001 Vitis vinifera
GSVIVG01004113001 Vitis vinifera
GSVIVG01004331001 Vitis vinifera
GSVIVG01004332001 Vitis vinifera
GSVIVG01004440001 Vitis vinifera
HanXRQChr15g0489541 Helianthus annuus
Haze_07058 Corylus avellana
Hma1.2p1_0277F.1_g111600 Hydrangea macrophylla
HPP92_017531 Vanilla planifolia
Hund19039 Selenicereus undatus
Lalb_Chr04g0264741 Lupinus albus
Lj1A1166G81 Lonicera japonica
Lj1A1166T78 Lonicera japonica
Lj4g0012990 Lotus japonicus
Lj6A128T19 Lonicera japonica
Lj6C128G4 Lonicera japonica
Lj6g0004292 Lotus japonicus
Lsat_1_v5_gn_4_109780 Lactuca sativa
Lsat_1_v5_gn_5_12680 Lactuca sativa
Manes.08G015000 Manihot esculenta
Mapoly0028s0050 Marchantia polymorpha
MBI15_g26850_MAGBIO Magnolia biondii
MCO08G225 Micromonas commoda
MD17G1131000 Malus domestica
Medtr1g043000 Medicago truncatula
Medtr4g064230 Medicago truncatula
Medtr4g134340 Medicago truncatula
Medtr8g042940 Medicago truncatula
MELO3C017782.2 Cucumis melo
MELO3C021804.2 Cucumis melo
Migut.H01639 Erythranthe guttata
Nitab4.5_0003942g0040 Nicotiana tabacum
Nitab4.5_0009068g0020 Nicotiana tabacum
Nn1g08288 Nelumbo nucifera
Nn1g08309 Nelumbo nucifera
Oeu016938.2 Olea europaea
Os01g0912600 Oryza sativa ssp. japonica
Peaxi162Scf00530g00824 Petunia axillaris
PGR004G1760 Punica granatum
PGSC0003DMG400022830 Solanum tuberosum
Phvul.003G154500 Phaseolus vulgaris
Potri.015G143000 Populus trichocarpa
Pp3c2_3010 Physcomitrium patens
PRCOL_00004477 Prasinoderma coloniale
Prupe.3G183500 Prunus persica
Psat0s2550g0080 Pisum sativum
PSO541G3178 Papaver somniferum
PSO675G1009 Papaver somniferum
QL05p066226 Quercus lobata
RcHm_v2.0_Chr2g0108841 Rosa chinensis
RcHm_v2.0_Chr2g0153021 Rosa chinensis
RcHm_v2.0_Chr6g0271881 Rosa chinensis
RcHm_v2.0_Chr6g0271891 Rosa chinensis
RcHm_v2.0_Chr6g0271991 Rosa chinensis
RcHm_v2.0_Chr7g0217251 Rosa chinensis
RcHm_v2.0_Chr7g0230211 Rosa chinensis
Rhsim06G0067400 Rhododendron simsii
Sabra08G0019200 Salix brachista
Sc25g0005660 Simmondsia chinensis
Sed0026896 Sechium edule
SEGI_33972 Sequoiadendron giganteum
SGA_v2.0_scaffold239G43984 Striga asiatica
SHI14289 Sapria himalayana
SMO358G0740 Selaginella moellendorffii
Solyc10g009000.4 Solanum lycopersicum
Sopen10g004780 Solanum pennellii
Sp1g24810 Schrenkiella parvula
Sp5g19680 Schrenkiella parvula
TAR633G0600 Trochodendron aralioides
TAR636G0408 Trochodendron aralioides
THA.LOC104803679 Tarenaya hassleriana
THA.LOC104809221 Tarenaya hassleriana
Thecc.08G197000 Theobroma cacao
Thhalv10008005m.g Eutrema salsugineum
TPR.G5994 Trifolium pratense
TWI38G1364 Tripterygium wilfordii
TWI63G0464 Tripterygium wilfordii
unitig_22.g5707 Utricularia gibba
vmacro21384 Vaccinium macrocarpon
VMungo1215G0123 Vigna mungo

User provided reference genes

Program Settings