Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35650 Brassica napus
A05p30810 Brassica napus
Aa31LG8G5630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1726 Anthoceros agrestis
Actinidia06666 Actinidia chinensis
Ah.05g168710 Amaranthus hybridus
AL3G32170 Arabidopsis lyrata
Aqoxy6G00053 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MTS4VB Arachis hypogaea
AT3G18790 Arabidopsis thaliana
ATR0051G034 Amborella trichopoda
ATR0772G105 Amborella trichopoda
Atru.chr10.136 Acer truncatum
Atru.chr9.1310 Acer truncatum
AUR62014898 Chenopodium quinoa
AUR62031104 Chenopodium quinoa
BcaB04g20746 Brassica carinata
BcaB06g25932 Brassica carinata
BcaC05g28571 Brassica carinata
BcaC09g48849 Brassica carinata
BolC1t04500H Brassica oleracea
BolC5t33400H Brassica oleracea
BraA01t03647Z Brassica rapa
BraA05t21923Z Brassica rapa
C01p45240 Brassica napus
C05p46730 Brassica napus
CAN.G1058.32 Capsicum annuum
CAN.G112.7 Capsicum annuum
CAN.G184.48 Capsicum annuum
CANSAT21G0749 Cannabis sativa
CARHR094200 Cardamine hirsuta
Carub.0003s1861 Capsella rubella
Ca_05756_v3 Cicer arietinum L.
Ca_07798_v3 Cicer arietinum L.
CBR_g84973 Chara braunii
Cc07_g17380 Coffea canephora
CDE08G1373 Ceratophyllum demersum
Cfa012638 Carpinus fangiana
Ciclev10016087m.g Citrus clementina
CiPaw.11G076400 Carya illinoinensis
ClCG01G004580 Citrullus lanatus
ClCG01G004620 Citrullus lanatus
ClCG09G016740 Citrullus lanatus
COL.COLO4_03460 Corchorus olitorius
COL.COLO4_10520 Corchorus olitorius
COL.COLO4_22423 Corchorus olitorius
Cpa.g.sc42.90 Carica papaya
Cre10.g427150 Chlamydomonas reinhardtii
CsaV3_7G031820 Cucumis sativus L.
CSS0002771 Camellia sinensis var. sinensis
DCAR_001862 Daucus carota
DCAR_011479 Daucus carota
Dinv05182 Davidia involucrata
Dinv09932 Davidia involucrata
Dinv15114 Davidia involucrata
Duzib187G0757 Durio zibethinus
ECA240G2833 Erigeron canadensis
EL10Ac8g20458 Beta vulgaris
Eucgr.C00068 Eucalyptus grandis
FAN07G1901 Fragaria x ananassa
FAN12G2661 Fragaria x ananassa
FAN17G2854 Fragaria x ananassa
FvH4_4g12620 Fragaria vesca
Glyma.06G234100 Glycine max
Glyma.09G114600 Glycine max
Glyma.14G078500 Glycine max
Gohir.A02G138300 Gossypium hirsutum
Gohir.A03G042500 Gossypium hirsutum
Gohir.D03G048900 Gossypium hirsutum
Gohir.D03G125150 Gossypium hirsutum
Gorai.003G050200 Gossypium raimondii
Gorai.003G131300 Gossypium raimondii
GSVIVG01026585001 Vitis vinifera
HanXRQChr03g0092051 Helianthus annuus
Haze_08022 Corylus avellana
Haze_26219 Corylus avellana
Hma1.2p1_0006F.1_g004860 Hydrangea macrophylla
Hma1.2p1_0006F.1_g004870 Hydrangea macrophylla
HPP92_002769 Vanilla planifolia
Lalb_Chr01g0006671 Lupinus albus
Lalb_Chr03g0030851 Lupinus albus
Lalb_Chr03g0030921 Lupinus albus
Lalb_Chr03g0030931 Lupinus albus
Lj3g0018695 Lotus japonicus
Lj4A308T25 Lonicera japonica
Lsat_1_v5_gn_3_121781 Lactuca sativa
Manes.01G056600 Manihot esculenta
Mapoly0026s0083 Marchantia polymorpha
MBI17_g31489_MAGBIO Magnolia biondii
MCO03G092 Micromonas commoda
MD12G1216200 Malus domestica
Medtr5g095510 Medicago truncatula
MELO3C023475.2 Cucumis melo
Migut.M00378 Erythranthe guttata
MSTRG.2689 Avicennia marina
Nitab4.5_0000777g0160 Nicotiana tabacum
Nitab4.5_0009675g0010 Nicotiana tabacum
Nn5g28723 Nelumbo nucifera
Os02g0602500 Oryza sativa ssp. japonica
Peaxi162Scf00134g00137 Petunia axillaris
Peaxi162Scf00134g00138 Petunia axillaris
Peaxi162Scf00424g00027 Petunia axillaris
Peaxi162Scf00751g00215 Petunia axillaris
PGR142G0905 Punica granatum
PGSC0003DMG400006987 Solanum tuberosum
Phvul.006G049400 Phaseolus vulgaris
Phvul.008G233000 Phaseolus vulgaris
Potri.017G060200 Populus trichocarpa
Pp3c13_15060 Physcomitrium patens
PRCOL_00003362 Prasinoderma coloniale
Prupe.6G322400 Prunus persica
Prupe.7G048200 Prunus persica
Psat2g008160 Pisum sativum
Psat4g130480 Pisum sativum
PSO210G1432 Papaver somniferum
QL09p054497 Quercus lobata
QL12p002363 Quercus lobata
RcHm_v2.0_Chr4g0411521 Rosa chinensis
Rhsim10G0141700 Rhododendron simsii
Sabra16G0204000 Salix brachista
Sabra17G0054100 Salix brachista
SalBow5G3393 Salvia bowleyana
Sc23g0003810 Simmondsia chinensis
Sc23g0004080 Simmondsia chinensis
Sc23g0004520 Simmondsia chinensis
Sc23g0004530 Simmondsia chinensis
Sed0008619 Sechium edule
SEGI_04038 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35115 Striga asiatica
SHI06523 Sapria himalayana
SMO134G0084 Selaginella moellendorffii
SMO274G0029 Selaginella moellendorffii
Solyc05g051070.3 Solanum lycopersicum
Sopen05g029520 Solanum pennellii
Sp3g16880 Schrenkiella parvula
TAR376G0935 Trochodendron aralioides
TAR628G0746 Trochodendron aralioides
THA.LOC104815455 Tarenaya hassleriana
Thecc.01G121500 Theobroma cacao
Thhalv10021236m.g Eutrema salsugineum
TPR.G8614 Trifolium pratense
TWI75G1338 Tripterygium wilfordii
unitig_699.g19713 Utricularia gibba
vmacro12447 Vaccinium macrocarpon
vmacro12830 Vaccinium macrocarpon
VMungo0540G2311 Vigna mungo
VMungo0720G0221 Vigna mungo
VMungo1127G1535 Vigna mungo
VMungo1309G1313 Vigna mungo
VMungo1309G1891 Vigna mungo
VMungo1309G1979 Vigna mungo
Zm00001eb116840 Zea mays
Zm00001eb143820 Zea mays
Zm00001eb246450 Zea mays
Zm00001eb267310 Zea mays
Zm00001eb424510 Zea mays

User provided reference genes

Program Settings