Gene: Pp3c13_15060

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c13_15060
  • Transcript Identifier Pp3c13_15060V3.1
  • Gene Type Coding gene
  • Location Chr13 : 10982832-10984136 : negative

Gene Family Information

  • ID HOM05D004662
  • #Genes/#Species 156/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c13_15060V3.1
  • pacid 32930007
  • alias Phpat.013G051000
  • alias Pp1s158_121V6
  • alias Phypa_107405
  • uniprot A9T3A6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000350
IBA
IEA
GOA Databasegeneration of catalytic spliceosome for second transesterification step
GO:0000350
IEA
InterProgeneration of catalytic spliceosome for second transesterification step
GO:0000389
IBA
GOA DatabasemRNA 3'-splice site recognition

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0071020
IBA
GOA Databasepost-spliceosomal complex
GO:0071014
IBA
GOA Databasepost-mRNA release spliceosomal complex
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0000974
IBA
GOA DatabasePrp19 complex
GO:0005829
IEA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037200 Pre-mRNA-splicing factor Isy1 superfamily
IPR009360 Pre-mRNA-splicing factor Isy1
IPR029012 Helix hairpin bin domain superfamily
Mapman id Description
16.2.5.2.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component ISY1/MAC8