Gene: COL.COLO4_22423

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_22423
  • Transcript Identifier COL.rna21171
  • Gene Type Coding gene
  • Location AWUE01017966.1 : 51315-52220 : negative

Gene Family Information

  • ID HOM05D004662
  • #Genes/#Species 156/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna21171
  • GenBank OMO83591.1
  • id gene22395
  • gene_name COLO4_22423
  • uniprot A0A1R3IM12

Descriptions

  • Description Isy1-like splicing
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000350
IEA
GOA Databasegeneration of catalytic spliceosome for second transesterification step
GO:0000350
IEA
InterProgeneration of catalytic spliceosome for second transesterification step

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G18790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009360 Pre-mRNA-splicing factor Isy1
IPR037200 Pre-mRNA-splicing factor Isy1 superfamily
IPR029012 Helix hairpin bin domain superfamily
Mapman id Description
16.2.5.2.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component ISY1/MAC8