Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p04860 Brassica napus
Aa31LG8G13450 Aethionema arabicum
Aa31LG8G13460 Aethionema arabicum
Aa31LG8G13470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.351 Anthoceros agrestis
Actinidia27924 Actinidia chinensis
Ah.01g019850 Amaranthus hybridus
Ah.01g019860 Amaranthus hybridus
AL3G47770 Arabidopsis lyrata
Aqoxy6G00945 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1QVL6J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.33V1D5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5EIT1K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CLIV5D Arachis hypogaea
AT2G35075 Arabidopsis thaliana
ATR0733G016 Amborella trichopoda
Atru.chr5.2894 Acer truncatum
AUR62011397 Chenopodium quinoa
AUR62016661 Chenopodium quinoa
BcaC06g36102 Brassica carinata
BcaNung07055 Brassica carinata
BolC7t41201H Brassica oleracea
BraA07t28278Z Brassica rapa
C07p07830 Brassica napus
CAN.G1015.3 Capsicum annuum
CAN.G1015.4 Capsicum annuum
CAN.G322.88 Capsicum annuum
CANSAT01G2998 Cannabis sativa
CANSAT21G0857 Cannabis sativa
CANSAT25G0492 Cannabis sativa
CARHR106270 Cardamine hirsuta
Carub.0003s2982 Capsella rubella
Ca_20818_v3 Cicer arietinum L.
Ca_20819_v3 Cicer arietinum L.
Ca_20826_v3 Cicer arietinum L.
Cc02_g18180 Coffea canephora
CDE02G1698 Ceratophyllum demersum
CDE02G3219 Ceratophyllum demersum
Cfa004948 Carpinus fangiana
Cfa005272 Carpinus fangiana
Cfa021301 Carpinus fangiana
Ciclev10027657m.g Citrus clementina
CiPaw.05G058800 Carya illinoinensis
ClCG09G017690 Citrullus lanatus
COL.COLO4_17776 Corchorus olitorius
Cpa.g.c40075 Carica papaya
Cpa.g.sc62.82 Carica papaya
Cpa.g.sc62.84 Carica papaya
Cre13.g572050 Chlamydomonas reinhardtii
CsaV3_2G014290 Cucumis sativus L.
CsaV3_2G014300 Cucumis sativus L.
DCAR_003628 Daucus carota
DCAR_003629 Daucus carota
Dinv42107 Davidia involucrata
Duzib052G1066 Durio zibethinus
ECA240G0059 Erigeron canadensis
EL10Ac9g21791 Beta vulgaris
Eucgr.I01219 Eucalyptus grandis
FAN15G2126 Fragaria x ananassa
FAN20G2900 Fragaria x ananassa
FAN24G2498 Fragaria x ananassa
FAN27G0869 Fragaria x ananassa
FvH4_2g07370 Fragaria vesca
Glyma.11G123500 Glycine max
Gohir.A01G181800 Gossypium hirsutum
Gohir.D01G172900 Gossypium hirsutum
Gorai.002G214500 Gossypium raimondii
GSVIVG01000374001 Vitis vinifera
GSVIVG01031879001 Vitis vinifera
HanXRQChr03g0074341 Helianthus annuus
Haze_02461 Corylus avellana
Haze_02463 Corylus avellana
Hma1.2p1_1353F.1_g277680 Hydrangea macrophylla
Hma1.2p1_1353F.1_g277700 Hydrangea macrophylla
Hma1.2p1_2724F.1_g327540 Hydrangea macrophylla
HPP92_012732 Vanilla planifolia
HPP92_012733 Vanilla planifolia
HPP92_012734 Vanilla planifolia
HPP92_012816 Vanilla planifolia
HPP92_012817 Vanilla planifolia
Hund06206 Selenicereus undatus
Lalb_Chr19g0138511 Lupinus albus
Lj3g0006928 Lotus japonicus
Lj5A204T93 Lonicera japonica
Lsat_1_v5_gn_3_62520 Lactuca sativa
Lsat_1_v5_gn_4_115641 Lactuca sativa
Lsat_1_v5_gn_9_109140 Lactuca sativa
Manes.15G145800 Manihot esculenta
Mapoly0101s0045 Marchantia polymorpha
MBI16_g13376_MAGBIO Magnolia biondii
MCO07G544 Micromonas commoda
MCO15G318 Micromonas commoda
MD10G1086500 Malus domestica
Medtr4g068580 Medicago truncatula
Medtr8g465860 Medicago truncatula
MELO3C021931.2 Cucumis melo
Migut.B00290 Erythranthe guttata
Nitab4.5_0004946g0030 Nicotiana tabacum
Nitab4.5_0009399g0010 Nicotiana tabacum
Nn5g29411 Nelumbo nucifera
Oeu035506.5 Olea europaea
Os03g0738200 Oryza sativa ssp. japonica
Peaxi162Scf00016g01337 Petunia axillaris
PGR142G2954 Punica granatum
Phvul.011G050300 Phaseolus vulgaris
Potri.004G147800 Populus trichocarpa
Pp3c10_4250 Physcomitrium patens
Prupe.8G112500 Prunus persica
Psat7g052560 Pisum sativum
Psat7g052720 Pisum sativum
Psat7g106640 Pisum sativum
Psat7g207400 Pisum sativum
PSO541G5018 Papaver somniferum
QL11p039255 Quercus lobata
RcHm_v2.0_Chr6g0259981 Rosa chinensis
RcHm_v2.0_Chr6g0259991 Rosa chinensis
RcHm_v2.0_Chr6g0260001 Rosa chinensis
RcHm_v2.0_Chr6g0260191 Rosa chinensis
RcHm_v2.0_Chr6g0260201 Rosa chinensis
RcHm_v2.0_Chr6g0260221 Rosa chinensis
RcHm_v2.0_Chr6g0260231 Rosa chinensis
RcHm_v2.0_Chr6g0260251 Rosa chinensis
RcHm_v2.0_Chr6g0260261 Rosa chinensis
RcHm_v2.0_Chr6g0260571 Rosa chinensis
RcHm_v2.0_Chr6g0260691 Rosa chinensis
RcHm_v2.0_Chr6g0260701 Rosa chinensis
RcHm_v2.0_Chr6g0260711 Rosa chinensis
RcHm_v2.0_Chr6g0260721 Rosa chinensis
RcHm_v2.0_Chr6g0260791 Rosa chinensis
Rhsim05G0078500 Rhododendron simsii
Sabra04G0098100 Salix brachista
SalBow6G1518 Salvia bowleyana
Sc14g0001720 Simmondsia chinensis
Sed0024635 Sechium edule
SEGI_16426 Sequoiadendron giganteum
SEGI_25812 Sequoiadendron giganteum
SEGI_32895 Sequoiadendron giganteum
SEGI_40710 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20593 Striga asiatica
SMO340G0206 Selaginella moellendorffii
Solyc01g109080.3 Solanum lycopersicum
Sopen01g051280 Solanum pennellii
Sp3g29240 Schrenkiella parvula
TAR381G0127 Trochodendron aralioides
TAR381G0863 Trochodendron aralioides
TAR381G1538 Trochodendron aralioides
THA.LOC104807342 Tarenaya hassleriana
Thecc.02G028700 Theobroma cacao
Thhalv10022517m.g Eutrema salsugineum
TPR.G10228 Trifolium pratense
TPR.G10239 Trifolium pratense
TWI75G0995 Tripterygium wilfordii
unitig_0.g75 Utricularia gibba
unitig_0.g76 Utricularia gibba
vmacro19475 Vaccinium macrocarpon
vmacro19476 Vaccinium macrocarpon
Zm00001eb056540 Zea mays

User provided reference genes

Program Settings