Gene: ATR0733G016
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0733G016
- Transcript Identifier ATR0733G016.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00059 : 3681838-3699950 : positive
Gene Family Information
- ID HOM05D004625
- #Genes/#Species 157/93
- Phylogenetic origin
- ID ORTHO05D006054
- #Genes/#Species 148/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00059.222.v1.0
- pacid 31566019
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | IEA | InterPro | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | |
| GO:0016310 | IEA | InterPro | phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004674 | IEA | InterPro | protein serine/threonine kinase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016301 | IEA | InterPro | kinase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039414 | SMG1, PIKK catalytic domain |
| IPR003152 | FATC domain |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain |
| IPR036940 | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily |
| IPR016024 | Armadillo-type fold |
| IPR031559 | Serine/threonine-protein kinase SMG1 |
| IPR011009 | Protein kinase-like domain superfamily |
| Mapman id | Description |
|---|---|
| 17.3.2.2.1 | Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.SMG1C protein kinase complex.kinase component SMG1 |