Gene: Cre13.g572050
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre13.g572050
- Transcript Identifier Cre13.g572050.t1.1
- Gene Type Coding gene
- Location chromosome_13 : 1410342-1430988 : positive
Gene Family Information
- ID HOM05D004625
- #Genes/#Species 157/93
- Phylogenetic origin
- ID ORTHO05D006054
- #Genes/#Species 148/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre13.g572050.v5.5
- pacid 30784348
- alias g14068.t1
Descriptions
- Description Nonsense-mediated decay (NMD) pathway protein
- Description Putative SMG1 homolog, a nonsense-mediated decay (NMD) pathway protein; phosphatidylinositol 3-kinase-related protein kinase. Best homologous candidate for SMG1 gene involved in nonsense mediated RNA decay; contains a Phosphatidylinositol 3-kinase and a
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | IEA | InterPro | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | |
| GO:0016310 | IEA | InterPro | phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004674 | IEA | InterPro | protein serine/threonine kinase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016301 | IEA | InterPro | kinase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031559 | Serine/threonine-protein kinase SMG1 |
| IPR003152 | FATC domain |
| IPR011989 | Armadillo-like helical |
| IPR036940 | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain |
| IPR016024 | Armadillo-type fold |
| IPR011009 | Protein kinase-like domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |