Gene: Ah.01g019860
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.01g019860
- Transcript Identifier Ah.01g019860-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_1 : 31861603-31880700 : negative
Gene Family Information
- ID HOM05D004625
- #Genes/#Species 157/93
- Phylogenetic origin
- ID ORTHO05D006054
- #Genes/#Species 148/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Ah.01g019860-v1.1.a1
Descriptions
- Description Serine/threonine-protein kinase SMG1 (SMG-1) (EC 2.7.11.1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | IEA | InterPro | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | |
| GO:0016310 | IEA | InterPro | phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004674 | IEA | InterPro | protein serine/threonine kinase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016301 | IEA | InterPro | kinase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031559 | Serine/threonine-protein kinase SMG1 |
| IPR003152 | FATC domain |
| IPR036940 | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain |
| IPR039414 | SMG1, PIKK catalytic domain |
| IPR016024 | Armadillo-type fold |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR011989 | Armadillo-like helical |
| Mapman id | Description |
|---|---|
| 17.3.2.2.1 | Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.SMG1C protein kinase complex.kinase component SMG1 |