Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20900 Brassica napus
A07p18140 Brassica napus
Aa31LG5G8750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3429 Anthoceros agrestis
Actinidia07256 Actinidia chinensis
Actinidia24228 Actinidia chinensis
Ah.08g223540 Amaranthus hybridus
AL128U10030 Arabidopsis lyrata
AL4G21290 Arabidopsis lyrata
Aqoxy2G01054 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.38CPMH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN2AAQ Arachis hypogaea
AT2G27350 Arabidopsis thaliana
ATR0820G275 Amborella trichopoda
Atru.chr3.3173 Acer truncatum
AUR62001524 Chenopodium quinoa
AUR62020259 Chenopodium quinoa
BcaB01g03068 Brassica carinata
BcaB02g10086 Brassica carinata
BcaB02g10087 Brassica carinata
BcaB06g28144 Brassica carinata
BcaC02g08247 Brassica carinata
BcaC02g10868 Brassica carinata
BolC4t23922H Brassica oleracea
BolC4t27203H Brassica oleracea
BraA04t17661Z Brassica rapa
BraA07t29532Z Brassica rapa
C04p24240 Brassica napus
C04p56710 Brassica napus
CAN.G745.9 Capsicum annuum
CAN.G919.39 Capsicum annuum
CANSAT54G1125 Cannabis sativa
CARHR119940 Cardamine hirsuta
Carub.0004s0797 Capsella rubella
Ca_01648_v3 Cicer arietinum L.
Cc01_g08850 Coffea canephora
CDE06G1573 Ceratophyllum demersum
CDE08G0566 Ceratophyllum demersum
Cfa009990 Carpinus fangiana
Ciclev10018416m.g Citrus clementina
Ciclev10030048m.g Citrus clementina
CiPaw.14G098200 Carya illinoinensis
COL.COLO4_34009 Corchorus olitorius
Cpa.g.sc195.20 Carica papaya
CsaV3_1G015050 Cucumis sativus L.
CSS0008379 Camellia sinensis var. sinensis
CSS0010321 Camellia sinensis var. sinensis
CSS0027671 Camellia sinensis var. sinensis
DCAR_012213 Daucus carota
Dinv08937 Davidia involucrata
Dinv22821 Davidia involucrata
Duzib150G0968 Durio zibethinus
Duzib168G0483 Durio zibethinus
Duzib211G0435 Durio zibethinus
ECA233G2149 Erigeron canadensis
EL10Ac7g16331 Beta vulgaris
Eucgr.B03827 Eucalyptus grandis
FAN11G2307 Fragaria x ananassa
FAN16G2710 Fragaria x ananassa
FAN21G3247 Fragaria x ananassa
FAN25G2333 Fragaria x ananassa
FAN25G2905 Fragaria x ananassa
FvH4_3g25610 Fragaria vesca
Glyma.11G181500 Glycine max
Glyma.12G091600 Glycine max
Gohir.A07G111000 Gossypium hirsutum
Gohir.A09G096900 Gossypium hirsutum
Gohir.D07G114800 Gossypium hirsutum
Gohir.D09G096700 Gossypium hirsutum
Gorai.001G123000 Gossypium raimondii
Gorai.006G113400 Gossypium raimondii
GSVIVG01036084001 Vitis vinifera
HanXRQChr13g0397601 Helianthus annuus
HanXRQChr14g0438001 Helianthus annuus
Haze_23351 Corylus avellana
HPP92_001102 Vanilla planifolia
Hund18773 Selenicereus undatus
Hund20933 Selenicereus undatus
Lalb_Chr01g0004921 Lupinus albus
Lj2A968G32 Lonicera japonica
Lj3g0000295 Lotus japonicus
Lj3g0004055 Lotus japonicus
Lsat_1_v5_gn_6_38401 Lactuca sativa
Lsat_1_v5_gn_8_23480 Lactuca sativa
Manes.04G001500 Manihot esculenta
Manes.11G164000 Manihot esculenta
Mapoly0015s0108 Marchantia polymorpha
MD03G1149500 Malus domestica
MD11G1168400 Malus domestica
Medtr2g086780 Medicago truncatula
MELO3C004671.2 Cucumis melo
Migut.D02430 Erythranthe guttata
MSTRG.18768 Avicennia marina
Nitab4.5_0000731g0060 Nicotiana tabacum
Nitab4.5_0000937g0090 Nicotiana tabacum
Nitab4.5_0005472g0060 Nicotiana tabacum
Nitab4.5_0008177g0040 Nicotiana tabacum
Nn6g34808 Nelumbo nucifera
Oeu031468.1 Olea europaea
Os04g0414100 Oryza sativa ssp. japonica
Peaxi162Scf00004g00187 Petunia axillaris
Peaxi162Scf00091g00076 Petunia axillaris
Peaxi162Scf00224g00117 Petunia axillaris
PGR102G3030 Punica granatum
PGSC0003DMG400005888 Solanum tuberosum
PGSC0003DMG400026348 Solanum tuberosum
Phvul.011G096000 Phaseolus vulgaris
Potri.004G196800 Populus trichocarpa
Potri.009G160100 Populus trichocarpa
Pp3c7_5530 Physcomitrium patens
Prupe.6G135500 Prunus persica
Psat2g032760 Pisum sativum
Psat5g173040 Pisum sativum
Psat5g257760 Pisum sativum
PSO339G4556 Papaver somniferum
PSO801G0782 Papaver somniferum
QL01p011880 Quercus lobata
RcHm_v2.0_Chr5g0045751 Rosa chinensis
Rhsim07G0227400 Rhododendron simsii
Rhsim13G0113400 Rhododendron simsii
Sabra04G0133400 Salix brachista
Sabra09G0125300 Salix brachista
Sc06g0008700 Simmondsia chinensis
Sc12g0004600 Simmondsia chinensis
Sc12g0004630 Simmondsia chinensis
Sed0016133 Sechium edule
SEGI_03435 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29603 Striga asiatica
SGA_v2.0_scaffold22G09840 Striga asiatica
SGA_v2.0_scaffold36G14345 Striga asiatica
SMO169G0062 Selaginella moellendorffii
SMO169G0248 Selaginella moellendorffii
SMO361G0078 Selaginella moellendorffii
SMO365G0021 Selaginella moellendorffii
Solyc06g074220.3 Solanum lycopersicum
Solyc11g068660.2 Solanum lycopersicum
Sopen06g030640 Solanum pennellii
Sopen11g027380 Solanum pennellii
Sp4g10140 Schrenkiella parvula
TAR362G0712 Trochodendron aralioides
TAR623G1480 Trochodendron aralioides
TAR633G1321 Trochodendron aralioides
TAR636G2188 Trochodendron aralioides
THA.LOC104800519 Tarenaya hassleriana
THA.LOC104826435 Tarenaya hassleriana
Thecc.09G279200 Theobroma cacao
Thhalv10001965m.g Eutrema salsugineum
TPR.G4527 Trifolium pratense
TWI75G1519 Tripterygium wilfordii
TWI79G0721 Tripterygium wilfordii
unitig_899.g14957 Utricularia gibba
vmacro03327 Vaccinium macrocarpon
vmacro03875 Vaccinium macrocarpon
vmacro03916 Vaccinium macrocarpon
VMungo1127G2084 Vigna mungo
Zm00001eb083750 Zea mays
Zm00001eb421980 Zea mays

User provided reference genes

Program Settings