Gene: Solyc11g068660.2

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc11g068660.2
Transcript Identifier Solyc11g068660.2.1
Gene Type Coding gene
Location SL4.0ch11 : 51360831-51365654 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004616
#Genes/#Species 157/91
Phylogenetic origin

ID ORTHO05D005860
#Genes/#Species 151/91
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc11g068660.2.1
uniprot A0A3Q7J0A9
gene_id Solyc11g068660

Descriptions

Short descriptions
Ortholog descriptions

Description OTU domain-containing protein (AHRD V3.3 *** A0A1Q3D2E3_CEPFO)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1902275	ISO	PLAZA Integrative Orthology	regulation of chromatin organization	AT2G27350
GO:0016578	ISO	PLAZA Integrative Orthology	histone deubiquitination	AT2G27350
GO:0045893	ISO	PLAZA Integrative Orthology	positive regulation of transcription, DNA-templated	AT2G27350
GO:0001558	ISO	PLAZA Integrative Orthology	regulation of cell growth	AT2G27350
GO:0045892	ISO	PLAZA Integrative Orthology	negative regulation of transcription, DNA-templated	AT2G27350
GO:0035065	ISO	PLAZA Integrative Orthology	regulation of histone acetylation	AT2G27350
GO:0033182	ISO	PLAZA Integrative Orthology	regulation of histone ubiquitination	AT2G27350
GO:0045927	ISO	PLAZA Integrative Orthology	positive regulation of growth	AT2G27350
GO:0031060	ISO	PLAZA Integrative Orthology	regulation of histone methylation	AT2G27350
GO:0016579	IBA	GOA Database	protein deubiquitination
GO:0070536	IEA	GOA Database	protein K63-linked deubiquitination

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042393	ISO	PLAZA Integrative Orthology	histone binding	AT2G27350
GO:0003682	ISO	PLAZA Integrative Orthology	chromatin binding	AT2G27350
GO:0005515	IEA	InterPro	protein binding
GO:0031491	ISO	PLAZA Integrative Orthology	nucleosome binding	AT2G27350
GO:0004843	IBA	GOA Database	thiol-dependent deubiquitinase
GO:0061578	IBA	GOA Database	Lys63-specific deubiquitinase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT2G27350
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G27350

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR009060	UBA-like superfamily
IPR003323	OTU domain
IPR038765	Papain-like cysteine peptidase superfamily

Mapman id	Description
19.2.3.1.2.5	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU6-12)