Gene: Sopen11g027380
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g027380
- Transcript Identifier Sopen11g027380.1
- Gene Type Coding gene
- Location Spenn-ch11 : 63059938-63064712 : positive
Gene Family Information
- ID HOM05D004616
- #Genes/#Species 157/91
- Phylogenetic origin
- ID ORTHO05D005860
- #Genes/#Species 151/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g027380.1
Descriptions
- Description OTU-like cysteine protease family protein | FUNCTIONS IN: cysteine-type peptidase activity | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , Ovarian tumour, otubain | BEST Arabidopsis thaliana protein match is: SEC-C motif-containing protein / OTU-like cysteine protease family protein .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031060 | ISO | PLAZA Integrative Orthology | regulation of histone methylation | AT2G27350 |
GO:0045927 | ISO | PLAZA Integrative Orthology | positive regulation of growth | AT2G27350 |
GO:0033182 | ISO | PLAZA Integrative Orthology | regulation of histone ubiquitination | AT2G27350 |
GO:1902275 | ISO | PLAZA Integrative Orthology | regulation of chromatin organization | AT2G27350 |
GO:0035065 | ISO | PLAZA Integrative Orthology | regulation of histone acetylation | AT2G27350 |
GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT2G27350 |
GO:0001558 | ISO | PLAZA Integrative Orthology | regulation of cell growth | AT2G27350 |
GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G27350 |
GO:0016578 | ISO | PLAZA Integrative Orthology | histone deubiquitination | AT2G27350 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0031491 | ISO | PLAZA Integrative Orthology | nucleosome binding | AT2G27350 |
GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT2G27350 |
GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT2G27350 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G27350 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G27350 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.3.1.2.5 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU6-12) |