Gene: Os04g0414100

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os04g0414100
  • Transcript Identifier Os04t0414100-01
  • Gene Type Coding gene
  • Location chr04 : 20458615-20462783 : positive

Gene Family Information

  • ID HOM05D004616
  • #Genes/#Species 157/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os04t0414100-01
  • MSU-ID LOC_Os04g33780.1
  • MSU-ID LOC_Os04g33780.2
  • uniprot Q7XVJ6

Descriptions

  • Description Similar to OSIGBa0137L20.4 protein.
  • Description Ovarian tumour, otubain domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035065
ISO
PLAZA Integrative Orthologyregulation of histone acetylation AT2G27350
GO:0016578
ISO
PLAZA Integrative Orthologyhistone deubiquitination AT2G27350
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G27350
GO:0001558
ISO
PLAZA Integrative Orthologyregulation of cell growth AT2G27350
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G27350
GO:0070536
IEA
GOA Databaseprotein K63-linked deubiquitination
GO:1902275
ISO
PLAZA Integrative Orthologyregulation of chromatin organization AT2G27350
GO:0033182
ISO
PLAZA Integrative Orthologyregulation of histone ubiquitination AT2G27350
GO:0045927
ISO
PLAZA Integrative Orthologypositive regulation of growth AT2G27350
GO:0031060
ISO
PLAZA Integrative Orthologyregulation of histone methylation AT2G27350
GO:0016579
IBA
GOA Databaseprotein deubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT2G27350
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G27350
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT2G27350
GO:0031491
ISO
PLAZA Integrative Orthologynucleosome binding AT2G27350
GO:0004843
IBA
GOA Databasethiol-dependent deubiquitinase
GO:0061578
IBA
GOA DatabaseLys63-specific deubiquitinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G27350
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G27350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038765 Papain-like cysteine peptidase superfamily
IPR003323 OTU domain
Mapman id Description
19.2.3.1.2.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU6-12)