Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42590 Brassica napus
A06p29750 Brassica napus
A09p07940 Brassica napus
Aa31LG11G680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis
Actinidia04515 Actinidia chinensis
AL3G51140 Arabidopsis lyrata
AL8G39970 Arabidopsis lyrata
Aqoxy2G03457 Aquilegia oxysepala
Aqoxy2G03458 Aquilegia oxysepala
Aqoxy5G00407 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea
AT3G28956 Arabidopsis thaliana
AT5G62950 Arabidopsis thaliana
ATR0829G086 Amborella trichopoda
Atru.chr4.2374 Acer truncatum
Atru.chr4.2398 Acer truncatum
Atru.chr5.182 Acer truncatum
AUR62028629 Chenopodium quinoa
AUR62033084 Chenopodium quinoa
BcaB02g09711 Brassica carinata
BcaB04g19957 Brassica carinata
BcaB07g29675 Brassica carinata
BcaC01g02544 Brassica carinata
BcaC03g18183 Brassica carinata
BcaC04g23378 Brassica carinata
BcaC08g46303 Brassica carinata
BolC2t12308H Brassica oleracea
BolC3t18624H Brassica oleracea
BolC6t39293H Brassica oleracea
BolC9t53811H Brassica oleracea
BraA02t09187Z Brassica rapa
BraA06t25922Z Brassica rapa
BraA09t36445Z Brassica rapa
C02p62490 Brassica napus
C03p63650 Brassica napus
C06p41320 Brassica napus
C09p08990 Brassica napus
CAN.G135.33 Capsicum annuum
CANSAT78G0168 Cannabis sativa
CARHR276760 Cardamine hirsuta
Carub.0004s0755 Capsella rubella
Carub.0008s2366 Capsella rubella
Ca_17658_v3 Cicer arietinum L.
CBR_g19683 Chara braunii
Cc03_g04240 Coffea canephora
CDE05G0131 Ceratophyllum demersum
Cfa006984 Carpinus fangiana
Ciclev10006087m.g Citrus clementina
CiPaw.01G195800 Carya illinoinensis
ClCG06G006470 Citrullus lanatus
COL.COLO4_21559 Corchorus olitorius
Cre13.g564550 Chlamydomonas reinhardtii
CsaV3_2G013430 Cucumis sativus L.
CSS0011446 Camellia sinensis var. sinensis
CSS0021073 Camellia sinensis var. sinensis
CSS0028808 Camellia sinensis var. sinensis
CSS0049273 Camellia sinensis var. sinensis
Dinv07545 Davidia involucrata
Dinv07599 Davidia involucrata
Dinv40544 Davidia involucrata
Duzib052G0452 Durio zibethinus
Duzib052G0972 Durio zibethinus
ECA246G0155 Erigeron canadensis
Eucgr.H03416 Eucalyptus grandis
FAN12G4296 Fragaria x ananassa
FAN13G2556 Fragaria x ananassa
FAN18G3311 Fragaria x ananassa
FvH4_4g01070 Fragaria vesca
FvH4_5g27570 Fragaria vesca
Glyma.11G217000 Glycine max
Glyma.18G039600 Glycine max
Gohir.A02G034100 Gossypium hirsutum
Gohir.D02G040900 Gossypium hirsutum
Gorai.005G045300 Gossypium raimondii
GSVIVG01008529001 Vitis vinifera
GSVIVG01036653001 Vitis vinifera
HanXRQChr05g0158611 Helianthus annuus
HanXRQChr06g0173001 Helianthus annuus
Haze_03750 Corylus avellana
Hma1.2p1_0549F.1_g176960 Hydrangea macrophylla
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla
HPP92_022914 Vanilla planifolia
Hund09493 Selenicereus undatus
Lalb_Chr06g0161741 Lupinus albus
Lj5g0008299 Lotus japonicus
Lj6C645G5 Lonicera japonica
Lj6g0017152 Lotus japonicus
Lsat_1_v5_gn_1_12980 Lactuca sativa
Lsat_1_v5_gn_6_95400 Lactuca sativa
Manes.02G208200 Manihot esculenta
Mapoly0090s0037 Marchantia polymorpha
MBI18_g09782_MAGBIO Magnolia biondii
MD13G1198900 Malus domestica
Medtr6g045603 Medicago truncatula
Medtr6g045613 Medicago truncatula
Medtr7g034585 Medicago truncatula
MELO3C014285.2 Cucumis melo
Migut.B00535 Erythranthe guttata
Nitab4.5_0000321g0230 Nicotiana tabacum
Nitab4.5_0004412g0030 Nicotiana tabacum
Nitab4.5_0004743g0130 Nicotiana tabacum
Nn1g01867 Nelumbo nucifera
Oeu042815.1 Olea europaea
Oeu058961.1 Olea europaea
Os12g0488800 Oryza sativa ssp. japonica
Peaxi162Scf00192g01617 Petunia axillaris
Peaxi162Scf00904g00217 Petunia axillaris
PGR004G1818 Punica granatum
PGR031G3247 Punica granatum
PGSC0003DMG400027326 Solanum tuberosum
Phvul.001G219600 Phaseolus vulgaris
Phvul.001G230900 Phaseolus vulgaris
Potri.005G067600 Populus trichocarpa
Pp3c21_14050 Physcomitrium patens
Prupe.1G020700 Prunus persica
Psat3g162000 Pisum sativum
Psat3g163880 Pisum sativum
PSO210G1425 Papaver somniferum
PSO210G1910 Papaver somniferum
PSO832G4509 Papaver somniferum
RcHm_v2.0_Chr4g0387641 Rosa chinensis
RcHm_v2.0_Chr6g0280701 Rosa chinensis
Rhsim01G0189100 Rhododendron simsii
Rhsim04G0197700 Rhododendron simsii
Sabra05G0055500 Salix brachista
SalBow1G3047 Salvia bowleyana
SalBow2G1663 Salvia bowleyana
SalBow8G0974 Salvia bowleyana
Sc19g0003960 Simmondsia chinensis
Sed0015447 Sechium edule
Sed0021164 Sechium edule
SEGI_07191 Sequoiadendron giganteum
SEGI_13490 Sequoiadendron giganteum
SGA_v2.0_scaffold353G49718 Striga asiatica
SMO343G0078 Selaginella moellendorffii
Solyc11g007810.3 Solanum lycopersicum
Sopen11g003670 Solanum pennellii
Sp2g26090 Schrenkiella parvula
TAR365G0299 Trochodendron aralioides
TAR636G3114 Trochodendron aralioides
THA.LOC104827037 Tarenaya hassleriana
Thecc.04G238000 Theobroma cacao
Thhalv10000370m.g Eutrema salsugineum
Thhalv10005100m.g Eutrema salsugineum
TPR.G14863 Trifolium pratense
TWI63G1720 Tripterygium wilfordii
unitig_748.g7305 Utricularia gibba
vmacro08367 Vaccinium macrocarpon
vmacro17995 Vaccinium macrocarpon
VMungo1383G1439 Vigna mungo
VMungo1383G2501 Vigna mungo
Zm00001eb076250 Zea mays
Zm00001eb076270 Zea mays
Zm00001eb076290 Zea mays
Zm00001eb310390 Zea mays

User provided reference genes

Program Settings