Gene: Os12g0488800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os12g0488800
  • Transcript Identifier Os12t0488800-01
  • Gene Type Coding gene
  • Location chr12 : 18311943-18312910 : negative

Gene Family Information

  • ID HOM05D004569
  • #Genes/#Species 158/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os12t0488800-01
  • MSU-ID LOC_Os12g30510.2
  • MSU-ID LOC_Os12g30510.3
  • MSU-ID LOC_Os12g30510.1
  • uniprot Q2QQM6

Descriptions

  • Description RNA polymerase II, Rpb4, core domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044237
IEA
GOA Databasecellular metabolic process
GO:0044237
IEA
InterProcellular metabolic process
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006384
IBA
IEA
GOA Databasetranscription initiation from RNA polymerase III promoter
GO:0006384
IEA
InterProtranscription initiation from RNA polymerase III promoter

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0030880
IEA
GOA DatabaseRNA polymerase complex
GO:0030880
IEA
InterProRNA polymerase complex
GO:0005666
IBA
IEA
GOA DatabaseRNA polymerase III complex
GO:0005666
IEA
InterProRNA polymerase III complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005574 RNA polymerase subunit RPB4/RPC9
IPR006590 RNA polymerase Rpb4/RPC9, core
IPR038846 DNA-directed RNA polymerase III subunit RPC9
IPR038324 Rpb4/RPC9 superfamily
IPR010997 HRDC-like superfamily
Mapman id Description
35.1 not assigned.annotated