Gene: Sopen11g003670
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g003670
- Transcript Identifier Sopen11g003670.1
- Gene Type Coding gene
- Location Spenn-ch11 : 2178522-2179586 : positive
Gene Family Information
- ID HOM05D004569
- #Genes/#Species 158/91
- Phylogenetic origin
- ID ORTHO05D005333
- #Genes/#Species 159/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g003670.1
Descriptions
- Description RNA polymerase II, Rpb4, core protein | FUNCTIONS IN: DNA-directed RNA polymerase activity, catalytic activity, nucleotide binding | INVOLVED IN: cellular metabolic process, transcription | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: HRDC-like , RNA polymerase II, Rpb4 , RNA polymerase II, Rpb4, core | BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0044237 | IEA | InterPro | cellular metabolic process | |
GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation | |
GO:0006384 | IEA | InterPro | transcription initiation from RNA polymerase III promoter |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000166 | IEA | InterPro | nucleotide binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0030880 | IEA | InterPro | RNA polymerase complex | |
GO:0005666 | IEA | InterPro | RNA polymerase III complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |