Gene: Sopen11g003670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g003670
  • Transcript Identifier Sopen11g003670.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 2178522-2179586 : positive

Gene Family Information

  • ID HOM05D004569
  • #Genes/#Species 158/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g003670.1

Descriptions

  • Description RNA polymerase II, Rpb4, core protein | FUNCTIONS IN: DNA-directed RNA polymerase activity, catalytic activity, nucleotide binding | INVOLVED IN: cellular metabolic process, transcription | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: HRDC-like , RNA polymerase II, Rpb4 , RNA polymerase II, Rpb4, core | BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044237
IEA
InterProcellular metabolic process
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006384
IEA
InterProtranscription initiation from RNA polymerase III promoter

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030880
IEA
InterProRNA polymerase complex
GO:0005666
IEA
InterProRNA polymerase III complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010997 HRDC-like superfamily
IPR005574 RNA polymerase subunit RPB4/RPC9
IPR006590 RNA polymerase Rpb4/RPC9, core
IPR038846 DNA-directed RNA polymerase III subunit RPC9
IPR038324 Rpb4/RPC9 superfamily
Mapman id Description
35.1 not assigned.annotated