Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03620 Brassica napus
A07p23140 Brassica napus
A09p49810 Brassica napus
Aa31LG10G11840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.50 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4282 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2127 Anthoceros agrestis
Actinidia00883 Actinidia chinensis
Actinidia38207 Actinidia chinensis
Ah.04g150190 Amaranthus hybridus
Ah.13g077400 Amaranthus hybridus
AL5G38370 Arabidopsis lyrata
Aqoxy2G00035_Aqoxy2G00036 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VDKY5W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XE2WF0 Arachis hypogaea
AT3G56940 Arabidopsis thaliana
ATR1096G103 Amborella trichopoda
Atru.chr1.1539 Acer truncatum
AUR62018443 Chenopodium quinoa
AUR62020990 Chenopodium quinoa
BcaB02g07634 Brassica carinata
BcaB02g08342 Brassica carinata
BcaC02g09879 Brassica carinata
BcaC07g40007 Brassica carinata
BcaC07g40105 Brassica carinata
BcaC08g44811 Brassica carinata
BolC4t25242H Brassica oleracea
BolC6t37555H Brassica oleracea
BraA04t16073Z Brassica rapa
BraA07t29976Z Brassica rapa
BraA09t40434Z Brassica rapa
C04p35620 Brassica napus
C06p23840 Brassica napus
C08p32210 Brassica napus
CAN.G959.37 Capsicum annuum
CANSAT78G1575 Cannabis sativa
CARHR167090 Cardamine hirsuta
Carub.0005s2368 Capsella rubella
Ca_08344_v3 Cicer arietinum L.
CBR_g50688 Chara braunii
CBR_g55376 Chara braunii
Cc06_g22740 Coffea canephora
CDE02G0342 Ceratophyllum demersum
CDE02G2354 Ceratophyllum demersum
CDE02G4696 Ceratophyllum demersum
CDE04G3757 Ceratophyllum demersum
Cfa019915 Carpinus fangiana
Ciclev10011842m.g Citrus clementina
CiPaw.09G162600 Carya illinoinensis
ClCG04G004930 Citrullus lanatus
ClCG10G010310 Citrullus lanatus
ClCG10G010320 Citrullus lanatus
Cpa.g.sc92.57 Carica papaya
Cre07.g346050 Chlamydomonas reinhardtii
Cre12.g510050 Chlamydomonas reinhardtii
CsaV3_4G031720 Cucumis sativus L.
CSS0026074 Camellia sinensis var. sinensis
CSS0045826 Camellia sinensis var. sinensis
DCAR_013513 Daucus carota
DCAR_016944 Daucus carota
Dinv11638 Davidia involucrata
Duzib093G1273 Durio zibethinus
Duzib128G1152 Durio zibethinus
ECA247G1747 Erigeron canadensis
EL10Ac3g07349 Beta vulgaris
Eucgr.A02177 Eucalyptus grandis
FAN19G1019 Fragaria x ananassa
FAN23G1063 Fragaria x ananassa
FAN26G0634 Fragaria x ananassa
FAN28G2842 Fragaria x ananassa
FvH4_1g28960 Fragaria vesca
Glyma.03G119500 Glycine max
Glyma.19G123800 Glycine max
Gohir.A01G192400 Gossypium hirsutum
Gohir.D01G177500 Gossypium hirsutum
Gorai.002G225700 Gossypium raimondii
GSVIVG01025841001 Vitis vinifera
HanXRQChr10g0291961 Helianthus annuus
Haze_20335 Corylus avellana
Hma1.2p1_0251F.1_g102500 Hydrangea macrophylla
HPP92_000650 Vanilla planifolia
HPP92_000696 Vanilla planifolia
Hund24509 Selenicereus undatus
Lalb_Chr14g0365301 Lupinus albus
Lalb_Chr22g0357681 Lupinus albus
Lalb_Chr22g0358071 Lupinus albus
Lalb_Chr22g0358081 Lupinus albus
Lalb_Chr22g0358091 Lupinus albus
Lalb_Chr24g0400681 Lupinus albus
Lj1A1078T64 Lonicera japonica
Lj1g0019045 Lotus japonicus
Lsat_1_v5_gn_9_30221 Lactuca sativa
Manes.09G073800 Manihot esculenta
Mapoly0124s0017 Marchantia polymorpha
MBI13_g30268_MAGBIO Magnolia biondii
MCO13G411 Micromonas commoda
MD00G1107700 Malus domestica
Medtr7g088340 Medicago truncatula
MELO3C026802.2 Cucumis melo
Migut.K00174 Erythranthe guttata
MSTRG.26191 Avicennia marina
MSTRG.6287 Avicennia marina
Nitab4.5_0000123g0170 Nicotiana tabacum
Nitab4.5_0001270g0120 Nicotiana tabacum
Oeu021019.1 Olea europaea
Oeu023011.1 Olea europaea
Oeu060750.2 Olea europaea
Os01g0279100 Oryza sativa ssp. japonica
Peaxi162Scf00003g05355 Petunia axillaris
PGR042G2423 Punica granatum
PGSC0003DMG400007188 Solanum tuberosum
Phvul.001G108700 Phaseolus vulgaris
Potri.006G027300 Populus trichocarpa
Potri.016G025000 Populus trichocarpa
Pp3c11_7910 Physcomitrium patens
Pp3c2_30650 Physcomitrium patens
Pp3c7_26570 Physcomitrium patens
PRCOL_00006479 Prasinoderma coloniale
Prupe.7G022500 Prunus persica
Psat3g082520 Pisum sativum
PSO339G0825 Papaver somniferum
PSO384G3158 Papaver somniferum
QL07p015188 Quercus lobata
RcHm_v2.0_Chr3g0494361 Rosa chinensis
Rhsim04G0119000 Rhododendron simsii
Rhsim04G0119100 Rhododendron simsii
Sabra06G0020200 Salix brachista
Sabra16G0030900 Salix brachista
SalBow1G4785 Salvia bowleyana
SalBow6G0122 Salvia bowleyana
Sc19g0007850 Simmondsia chinensis
Sed0025713 Sechium edule
SEGI_00644 Sequoiadendron giganteum
SEGI_05566 Sequoiadendron giganteum
SEGI_20922 Sequoiadendron giganteum
SEGI_29193 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22316 Striga asiatica
SGA_v2.0_scaffold69G23196 Striga asiatica
SMO115G0161 Selaginella moellendorffii
SMO119G0375 Selaginella moellendorffii
Solyc10g077040.2 Solanum lycopersicum
Sopen10g028720 Solanum pennellii
Sp5g05650 Schrenkiella parvula
TAR369G0680 Trochodendron aralioides
TAR546G0001 Trochodendron aralioides
THA.LOC104803235 Tarenaya hassleriana
THA.LOC104824384 Tarenaya hassleriana
Thecc.05G130200 Theobroma cacao
Thhalv10006009m.g Eutrema salsugineum
TPR.G23197 Trifolium pratense
TWI53G2040 Tripterygium wilfordii
TWI77G0093 Tripterygium wilfordii
unitig_37.g12773 Utricularia gibba
unitig_46.g18485 Utricularia gibba
vmacro08967 Vaccinium macrocarpon
VMungo1383G3341 Vigna mungo
Zm00001eb129000 Zea mays
Zm00001eb332650 Zea mays

User provided reference genes

Program Settings