Gene: Sopen10g028720

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g028720
  • Transcript Identifier Sopen10g028720.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 76653505-76655988 : negative

Gene Family Information

  • ID HOM05D004558
  • #Genes/#Species 158/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g028720.1

Descriptions

  • Description Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) - Gossypium hirsutum (Upland cotton), Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site. | COPPER RESPONSE DEFECT 1 (CRD1) | FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding | INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis | LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase , Ferritin/ribonucleotide reductase-like , Rubrerythrin ., Rubrerythrin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
InterProphotosynthesis
GO:0015995
IEA
InterProchlorophyll biosynthetic process
GO:1901401
ISO
PLAZA Integrative Orthologyregulation of tetrapyrrole metabolic process AT3G56940
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT3G56940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0048529
IEA
InterPromagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G56940
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56940
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G56940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009706
ISO
PLAZA Integrative Orthologychloroplast inner membrane AT3G56940
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G56940
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G56940
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G56940
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT3G56940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009078 Ferritin-like superfamily
IPR008434 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
IPR003251 Rubrerythrin
Mapman id Description
7.13.1.3.1 Coenzyme metabolism.chlorophyll metabolism.chlorophyll biosynthesis.Mg-protoporphyrin IX monomethylester cyclase complex.catalytic component CRD1