Gene: Os01g0279100

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0279100
  • Transcript Identifier Os01t0279100-01
  • Gene Type Coding gene
  • Location chr01 : 9874423-9876264 : positive

Gene Family Information

  • ID HOM05D004558
  • #Genes/#Species 158/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0279100-01
  • MSU-ID LOC_Os01g17170.1
  • MSU-ID LOC_Os01g17170.2
  • symbol OsCRD1
  • symbol YGL8
  • symbol YL-1
  • symbol PNZIP
  • name PHARBITIS NIL LEUCINE ZIPPER
  • name Yellow-Leaf 1
  • name yellow-green leaf 8
  • name Rice Copper Response Defect 1
  • uniprot Q9SDJ2

Descriptions

  • Description Subunit of magnesium-protoporphyrin IX monomethyl ester cyclase (EC:1.14.13.81), Core component of FLU-YGL8-LCAA-POR complex, Chlorophyll biosynthesis, Chloroplast development
  • Description Similar to Magnesium-protoporphyrin ix monomethyl ester cyclase (Fragment).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0015979
IEA
InterProphotosynthesis
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT3G56940
GO:1901401
ISO
PLAZA Integrative Orthologyregulation of tetrapyrrole metabolic process AT3G56940
GO:0015995
IBA
IEA
GOA Databasechlorophyll biosynthetic process
GO:0015995
IEA
InterProchlorophyll biosynthetic process
GO:0036068
IEA
GOA Databaselight-independent chlorophyll biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G56940
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56940
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G56940
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0048529
IBA
IEA
GOA Databasemagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
GO:0048529
IEA
InterPromagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0005506
IEA
GOA Databaseiron ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G56940
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G56940
GO:0009706
ISO
PLAZA Integrative Orthologychloroplast inner membrane AT3G56940
GO:0009535
IBA
GOA Databasechloroplast thylakoid membrane
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009078 Ferritin-like superfamily
IPR008434 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
IPR003251 Rubrerythrin
Mapman id Description
7.13.1.3.1 Coenzyme metabolism.chlorophyll metabolism.chlorophyll biosynthesis.Mg-protoporphyrin IX monomethylester cyclase complex.catalytic component CRD1