Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01200 Brassica napus
A07p01220 Brassica napus
Aa31LG8G16570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.906 Anthoceros agrestis
Actinidia25256 Actinidia chinensis
Ah.14g085220 Amaranthus hybridus
AL3G48690 Arabidopsis lyrata
Aqoxy7G01232 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1S90RN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.43843R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A138U3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DFU5EN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PT0GJ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UXE40S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VVLB7Q Arachis hypogaea
AT2G19560 Arabidopsis thaliana
ATR0026G010 Amborella trichopoda
ATR0026G011 Amborella trichopoda
ATR0026G021 Amborella trichopoda
Atru.chr7.1579 Acer truncatum
AUR62027494 Chenopodium quinoa
AUR62033986 Chenopodium quinoa
BcaB03g16690 Brassica carinata
BcaB03g16691 Brassica carinata
BcaB03g16744 Brassica carinata
BcaB04g16932 Brassica carinata
BcaB04g16933 Brassica carinata
BcaB08g34873 Brassica carinata
BcaC03g15601 Brassica carinata
BcaC05g26001 Brassica carinata
BcaC06g36598 Brassica carinata
BolC2t09319H Brassica oleracea
BolC5t30662H Brassica oleracea
BolC7t40641H Brassica oleracea
BraA07t27910Z Brassica rapa
C02p33900 Brassica napus
C05p19590 Brassica napus
C07p02330 Brassica napus
CAN.G1208.1 Capsicum annuum
CANSAT56G0596 Cannabis sativa
CANSAT56G1313 Cannabis sativa
CARHR051750 Cardamine hirsuta
CARHR051760 Cardamine hirsuta
CARHR052790 Cardamine hirsuta
CARHR052830 Cardamine hirsuta
CARHR054260 Cardamine hirsuta
CARHR054270 Cardamine hirsuta
CARHR054280 Cardamine hirsuta
CARHR109990 Cardamine hirsuta
CARHR122310 Cardamine hirsuta
CARHR122320 Cardamine hirsuta
Carub.0003s3385 Capsella rubella
Ca_08460_v3 Cicer arietinum L.
Ca_30052_v3 Cicer arietinum L.
CBR_g78884 Chara braunii
Cc06_g11330 Coffea canephora
CDE02G2136 Ceratophyllum demersum
Cfa025229 Carpinus fangiana
Ciclev10008462m.g Citrus clementina
CiPaw.03G217000 Carya illinoinensis
ClCG11G001780 Citrullus lanatus
COL.COLO4_18209 Corchorus olitorius
Cpa.g.sc283.9 Carica papaya
Cre02.g110400 Chlamydomonas reinhardtii
CsaV3_2G001490 Cucumis sativus L.
CSS0033534 Camellia sinensis var. sinensis
DCAR_011978 Daucus carota
Dinv36760 Davidia involucrata
Duzib150G1454 Durio zibethinus
ECA240G0155 Erigeron canadensis
EL10Ac8g19227 Beta vulgaris
Eucgr.C00900 Eucalyptus grandis
FAN19G1322 Fragaria x ananassa
FAN23G0078 Fragaria x ananassa
FAN23G1719 Fragaria x ananassa
FAN26G1375 Fragaria x ananassa
FAN26G2732 Fragaria x ananassa
FAN28G2769 Fragaria x ananassa
FvH4_1g07290 Fragaria vesca
Glyma.13G103500 Glycine max
Glyma.17G055500 Glycine max
Gohir.A06G072200 Gossypium hirsutum
Gohir.D06G070800 Gossypium hirsutum
Gorai.010G082500 Gossypium raimondii
GSVIVG01015212001 Vitis vinifera
HanXRQChr09g0238111 Helianthus annuus
Haze_25904 Corylus avellana
Hma1.2p1_0800F.1_g220090 Hydrangea macrophylla
Hma1.2p1_0800F.1_g220100 Hydrangea macrophylla
HPP92_010492 Vanilla planifolia
HPP92_010493 Vanilla planifolia
Lalb_Chr13g0299741 Lupinus albus
Lj4g0008156 Lotus japonicus
Lj7A674G30 Lonicera japonica
Lsat_1_v5_gn_7_37341 Lactuca sativa
Manes.16G102700 Manihot esculenta
Mapoly0005s0151 Marchantia polymorpha
MBI01_g09956_MAGBIO Magnolia biondii
MCO16G315 Micromonas commoda
MD02G1077700 Malus domestica
MD15G1206300 Malus domestica
MD15G1352000 Malus domestica
Medtr7g091650 Medicago truncatula
MELO3C004622.2 Cucumis melo
Migut.J00603 Erythranthe guttata
MSTRG.17774 Avicennia marina
Nitab4.5_0005634g0070 Nicotiana tabacum
Nitab4.5_0011030g0010 Nicotiana tabacum
Nn6g35452 Nelumbo nucifera
Oeu018237.1 Olea europaea
Oeu018425.1 Olea europaea
Os09g0386400 Oryza sativa ssp. japonica
Peaxi162Scf00709g00003 Petunia axillaris
PGR142G0229 Punica granatum
PGSC0003DMG400013151 Solanum tuberosum
PGSC0003DMG400022053 Solanum tuberosum
Phvul.003G137300 Phaseolus vulgaris
Potri.006G221700 Populus trichocarpa
Pp3c17_12810 Physcomitrium patens
PRCOL_00001383 Prasinoderma coloniale
Prupe.7G211100 Prunus persica
Psat3g072560 Pisum sativum
PSO063G0639 Papaver somniferum
PSO832G3660 Papaver somniferum
QL02p062827 Quercus lobata
RcHm_v2.0_Chr2g0093221 Rosa chinensis
RcHm_v2.0_Chr7g0206721 Rosa chinensis
RcHm_v2.0_Chr7g0207111 Rosa chinensis
RcHm_v2.0_Chr7g0207281 Rosa chinensis
RcHm_v2.0_Chr7g0230831 Rosa chinensis
Rhsim05G0022000 Rhododendron simsii
Sabra06G0171200 Salix brachista
SalBow6G2464 Salvia bowleyana
Sc18g0002070 Simmondsia chinensis
Sed0012435 Sechium edule
SEGI_06455 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21601 Striga asiatica
SGA_v2.0_scaffold62G21603 Striga asiatica
SGA_v2.0_scaffold62G21604 Striga asiatica
SHI24590 Sapria himalayana
SMO117G0048 Selaginella moellendorffii
Solyc07g039210.4 Solanum lycopersicum
Solyc12g070127.1 Solanum lycopersicum
Solyc12g070150.1 Solanum lycopersicum
Sopen07g017560 Solanum pennellii
Sopen12g027230 Solanum pennellii
Sp2g03965 Schrenkiella parvula
Sp3g32930 Schrenkiella parvula
TAR626G1836 Trochodendron aralioides
TAR633G1811 Trochodendron aralioides
THA.LOC104820025 Tarenaya hassleriana
Thecc.09G090300 Theobroma cacao
Thhalv10022707m.g Eutrema salsugineum
TPR.G3725 Trifolium pratense
TWI34G0432 Tripterygium wilfordii
unitig_748.g7306 Utricularia gibba
vmacro17227 Vaccinium macrocarpon
VMungo1215G0680 Vigna mungo
Zm00001eb311810 Zea mays

User provided reference genes

Program Settings