Gene: Carub.0003s3385

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s3385
  • Transcript Identifier Carub.0003s3385.1
  • Gene Type Coding gene
  • Location scaffold_3 : 14353943-14357052 : negative

Gene Family Information

  • ID HOM05D004528
  • #Genes/#Species 159/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s3385.v1.1
  • pacid 39239264
  • synonym Carubv10013822m.g

Descriptions

  • Description PTHR12732 - UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016973
IEA
InterPropoly(A)+ mRNA export from nucleus
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT2G19560
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT2G19560
GO:0060968
ISO
PLAZA Integrative Orthologyregulation of gene silencing AT2G19560
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT2G19560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G19560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G19560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000717 Proteasome component (PCI) domain
IPR045114 Csn12 family
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
16.10.2.2 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.component PCID2/Thp1