Gene: AT2G19560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G19560
  • Transcript Identifier AT2G19560.1
  • Gene Type Coding gene
  • Location Chr2 : 8465924-8469069 : negative

Gene Family Information

  • ID HOM05D004528
  • #Genes/#Species 159/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G19560.1
  • symbol EER5
  • Alias AtTHP1,ESSP1,ectopic expression of seed storage proteins 1
  • full_name ENHANCED ETHYLENE RESPONSE 5
  • uniprot Q8GWE6

Descriptions

  • Description proteasome family protein
  • Computational description ENHANCED ETHYLENE RESPONSE 5 (EER5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); Has 771 Blast hits to 770 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 323; Plants - 58; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016973
IMP
IBA
IEA
Gene Ontologypoly(A)+ mRNA export from nucleus1 2
GO:0016973
IEA
InterPropoly(A)+ mRNA export from nucleus
GO:0071033
IBA
Gene Ontologynuclear retention of pre-mRNA at the site of transcription2
GO:0000973
IBA
Gene Ontologyposttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery2
GO:0006368
IBA
Gene Ontologytranscription elongation from RNA polymerase II promoter2
GO:0060968
IMP
Gene Ontologyregulation of gene silencing3
GO:0048364
IMP
Gene Ontologyroot development4
GO:0009873
IPI
Gene Ontologyethylene-activated signaling pathway4
GO:0009723
IMP
Gene Ontologyresponse to ethylene4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IBA
Gene Ontologydouble-stranded DNA binding2
GO:0003723
IBA
Gene OntologyRNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0070390
IBA
Gene Ontologytranscription export complex 22
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000717 Proteasome component (PCI) domain
IPR045114 Csn12 family
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
16.10.2.2 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.component PCID2/Thp1