Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16520 Brassica napus
A03p55840 Brassica napus
A08p21270 Brassica napus
Aa31sc16G230 Aethionema arabicum
Actinidia13576 Actinidia chinensis
Actinidia24699 Actinidia chinensis
Actinidia25004 Actinidia chinensis
Ah.13g066850 Amaranthus hybridus
AL7G27910 Arabidopsis lyrata
AL8G25740 Arabidopsis lyrata
Aqoxy7G00754 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JD3YM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WP6JS3 Arachis hypogaea
AT4G25230 Arabidopsis thaliana
AT5G51450 Arabidopsis thaliana
ATR0589G031 Amborella trichopoda
Atru.chr1.722 Acer truncatum
Atru.chr1.723 Acer truncatum
AUR62002199 Chenopodium quinoa
AUR62015503 Chenopodium quinoa
BcaB03g12459 Brassica carinata
BcaC06g32827 Brassica carinata
BcaC07g38178 Brassica carinata
BcaC07g38179 Brassica carinata
BcaC07g38180 Brassica carinata
BcaC09g50792 Brassica carinata
BcaNung06355 Brassica carinata
BolC1t01999H Brassica oleracea
BolC7t45898H Brassica oleracea
BraA01t01605Z Brassica rapa
BraA03t14655Z Brassica rapa
BraA08t34076Z Brassica rapa
C07p54120 Brassica napus
CAN.G839.2 Capsicum annuum
CARHR232640 Cardamine hirsuta
Carub.0007s1579 Capsella rubella
Carub.0008s1147 Capsella rubella
Ca_06750_v3 Cicer arietinum L.
Ca_14040_v3 Cicer arietinum L.
CBR_g4830 Chara braunii
Cc02_g04230 Coffea canephora
CDE02G3300 Ceratophyllum demersum
CDE11G0295 Ceratophyllum demersum
Cfa008172 Carpinus fangiana
Ciclev10004605m.g Citrus clementina
CiPaw.03G093600 Carya illinoinensis
CiPaw.04G060100 Carya illinoinensis
ClCG09G013190 Citrullus lanatus
ClCG09G013200 Citrullus lanatus
COL.COLO4_14126 Corchorus olitorius
Cpa.g.sc3.319 Carica papaya
Cpa.g.sc3.320 Carica papaya
Cre05.g231050 Chlamydomonas reinhardtii
CsaV3_6G036820 Cucumis sativus L.
CSS0001277 Camellia sinensis var. sinensis
CSS0008253 Camellia sinensis var. sinensis
CSS0023984 Camellia sinensis var. sinensis
DCAR_018107 Daucus carota
Dinv22949 Davidia involucrata
Dinv28569 Davidia involucrata
Duzib068G0492 Durio zibethinus
Duzib205G0424 Durio zibethinus
ECA238G4038 Erigeron canadensis
EL10Ac1g01861 Beta vulgaris
EL10Ac3g05841 Beta vulgaris
Eucgr.K00157 Eucalyptus grandis
FAN01G2021 Fragaria x ananassa
FAN03G1842 Fragaria x ananassa
FAN06G0097 Fragaria x ananassa
FAN06G3392 Fragaria x ananassa
FAN10G0128 Fragaria x ananassa
FvH4_7g27570 Fragaria vesca
Glyma.04G130500 Glycine max
Glyma.06G316600 Glycine max
Gohir.A07G041300 Gossypium hirsutum
Gohir.A12G198700 Gossypium hirsutum
Gohir.D07G045400 Gossypium hirsutum
Gohir.D12G201400 Gossypium hirsutum
Gorai.001G048500 Gossypium raimondii
Gorai.008G216500 Gossypium raimondii
GSVIVG01018636001 Vitis vinifera
HanXRQChr07g0205911 Helianthus annuus
HanXRQChr14g0461391 Helianthus annuus
Hma1.2p1_1132F.1_g260340 Hydrangea macrophylla
Hma1.2p1_1132F.1_g260350 Hydrangea macrophylla
Hma1.2p1_1640F.1_g295066 Hydrangea macrophylla
Hma1.2p1_1640F.1_g295070 Hydrangea macrophylla
HPP92_021040 Vanilla planifolia
HPP92_027424 Vanilla planifolia
Hund04598 Selenicereus undatus
Hund11825 Selenicereus undatus
Lalb_Chr04g0264301 Lupinus albus
Lalb_Chr04g0264311 Lupinus albus
Lalb_Chr15g0079611 Lupinus albus
Lalb_Chr18g0049081 Lupinus albus
Lj3g0006861 Lotus japonicus
Lj8C42G3 Lonicera japonica
Lsat_1_v5_gn_2_129141 Lactuca sativa
Lsat_1_v5_gn_2_129181 Lactuca sativa
Lsat_1_v5_gn_3_74740 Lactuca sativa
Lsat_1_v5_gn_4_100040 Lactuca sativa
Lsat_1_v5_gn_9_52140 Lactuca sativa
Manes.06G135100 Manihot esculenta
Manes.14G035800 Manihot esculenta
Mapoly0141s0003 Marchantia polymorpha
Mapoly0259s0001 Marchantia polymorpha
MBI04_g41911_MAGBIO Magnolia biondii
MBI04_g44458_MAGBIO Magnolia biondii
MD07G1254100 Malus domestica
Medtr3g007760 Medicago truncatula
MELO3C014338.2 Cucumis melo
Migut.F00473 Erythranthe guttata
MSTRG.8823 Avicennia marina
Nitab4.5_0000262g0140 Nicotiana tabacum
Nitab4.5_0000448g0150 Nicotiana tabacum
Nn6g33992 Nelumbo nucifera
Oeu015322.1 Olea europaea
Oeu022490.1 Olea europaea
Os07g0484300 Oryza sativa ssp. japonica
Peaxi162Scf00054g02212 Petunia axillaris
PGR042G2749 Punica granatum
Phvul.005G010300 Phaseolus vulgaris
Potri.001G124000 Populus trichocarpa
Potri.003G109400 Populus trichocarpa
Pp3c13_9770 Physcomitrium patens
Pp3c3_10340 Physcomitrium patens
Prupe.2G277400 Prunus persica
Psat5g226800 Pisum sativum
PSO017G1204 Papaver somniferum
PSO170G1118 Papaver somniferum
QL05p008713 Quercus lobata
QL09p019881 Quercus lobata
RcHm_v2.0_Chr1g0374441 Rosa chinensis
Rhsim03G0167900 Rhododendron simsii
Rhsim03G0168100 Rhododendron simsii
Sabra01G0095600 Salix brachista
Sabra03G0075900 Salix brachista
Sc13g0007910 Simmondsia chinensis
Sed0007620 Sechium edule
Sed0019493 Sechium edule
SEGI_07953 Sequoiadendron giganteum
SEGI_31032 Sequoiadendron giganteum
SEGI_41248 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23600 Striga asiatica
SMO298G0006 Selaginella moellendorffii
Sopen06g010960 Solanum pennellii
Sp6g13610 Schrenkiella parvula
Sp7g23250 Schrenkiella parvula
TAR374G1004 Trochodendron aralioides
TAR375G0675 Trochodendron aralioides
THA.LOC104808282 Tarenaya hassleriana
THA.LOC104825064 Tarenaya hassleriana
Thecc.03G156200 Theobroma cacao
Thhalv10014220m.g Eutrema salsugineum
Thhalv10024774m.g Eutrema salsugineum
TPR.G12300 Trifolium pratense
TWI23G1058 Tripterygium wilfordii
vmacro06795 Vaccinium macrocarpon
Zm00001eb105020 Zea mays
Zm00001eb321470 Zea mays

User provided reference genes

Program Settings