Gene: TPR.G12300

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G12300
  • Transcript Identifier TPR.T12699
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG3 : 29754465-29759518 : positive

Gene Family Information

  • ID HOM05D004509
  • #Genes/#Species 160/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA12699.v2
  • id Tp57577_TGAC_v2_gene12300.v2
  • pacid 35990274
  • uniprot A0A2K3P3E2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034052
ISO
PLAZA Integrative Orthologypositive regulation of plant-type hypersensitive response AT5G51450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IEA
GOA Databaseubiquitin binding
GO:0043130
IEA
InterProubiquitin binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G51450
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G51450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G51450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035667 Plant RIN2/3, CUE domain
IPR001841 Zinc finger, RING-type
IPR003892 Ubiquitin system component CUE
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RIN)