Gene: SGA_v2.0_scaffold70G23600

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold70G23600
Transcript Identifier SGA_v2.0_scaffold70T23600
Gene Type Coding gene
Location scaffold70 : 1277898-1284861 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004509
#Genes/#Species 160/89
Phylogenetic origin

ID ORTHO05D005568
#Genes/#Species 155/89
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product E3 ubiquitin-protein ligase synoviolin

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034052	ISO	PLAZA Integrative Orthology	positive regulation of plant-type hypersensitive response	AT5G51450

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0043130	IEA	InterPro	ubiquitin binding
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT5G51450
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G51450

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT5G51450

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR035667	Plant RIN2/3, CUE domain
IPR001841	Zinc finger, RING-type
IPR003892	Ubiquitin system component CUE

Mapman id	Description
19.2.2.1.4.3.3.5	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RIN)