Gene: AT4G25230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G25230
  • Transcript Identifier AT4G25230.2
  • Gene Type Coding gene
  • Location Chr4 : 12924446-12928671 : positive

Gene Family Information

  • ID HOM05D004509
  • #Genes/#Species 160/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G25230.2
  • symbol RIN2
  • uniprot Q8VYC8

Descriptions

  • Description RPM1 interacting protein 2
  • Computational description RPM1 interacting protein 2 (RIN2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 3 (TAIR:AT5G51450.1); Has 2005 Blast hits to 1973 proteins in 236 species: Archae - 0; Bacteria - 2; Metazoa - 699; Fungi - 246; Plants - 674; Viruses - 9; Other Eukaryotes - 375 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009626
IEA
GOA Databaseplant-type hypersensitive response
GO:0006952
IEA
GOA Databasedefense response
GO:0034052
IGI
IBA
Gene Ontologypositive regulation of plant-type hypersensitive response1 2
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IEA
Gene Ontologyubiquitin binding
GO:0043130
IEA
InterProubiquitin binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity2
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0004842
IDA
ISS
Gene Ontologyubiquitin-protein transferase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
IBA
Gene Ontologyplasma membrane1 2
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035667 Plant RIN2/3, CUE domain
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR003892 Ubiquitin system component CUE
Mapman id Description
19.2.2.1.4.3.3.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RIN)