Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p15310 Brassica napus
Aa31LG2G960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4108 Anthoceros agrestis
Actinidia06268 Actinidia chinensis
Ah.03g137500 Amaranthus hybridus
AL2G11360 Arabidopsis lyrata
Aqoxy7G00557 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5IKX6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8LX4B2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.95EFUZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T70L3V Arachis hypogaea
AT1G63780 Arabidopsis thaliana
ATR0307G081 Amborella trichopoda
Atru.chr3.2871 Acer truncatum
AUR62026831 Chenopodium quinoa
AUR62037222 Chenopodium quinoa
BcaB07g31410 Brassica carinata
BcaB07g31550 Brassica carinata
BcaC04g22503 Brassica carinata
BolC4t24495H Brassica oleracea
BolC9t54754H Brassica oleracea
BraA09t37176Z Brassica rapa
C09p18580 Brassica napus
CAN.G574.29 Capsicum annuum
CANSAT80G2023 Cannabis sativa
CARHR047410 Cardamine hirsuta
Carub.0002s0106 Capsella rubella
Ca_14282_v3 Cicer arietinum L.
CBR_g37218 Chara braunii
Cc06_g06430 Coffea canephora
CDE05G2398 Ceratophyllum demersum
Cfa019303 Carpinus fangiana
Cfa019574 Carpinus fangiana
Cfa026630 Carpinus fangiana
Ciclev10032276m.g Citrus clementina
CiPaw.11G047300 Carya illinoinensis
ClCG01G007690 Citrullus lanatus
COL.COLO4_25826 Corchorus olitorius
Cpa.g.sc51.97 Carica papaya
Cre10.g454100 Chlamydomonas reinhardtii
CsaV3_5G024730 Cucumis sativus L.
CSS0003663 Camellia sinensis var. sinensis
CSS0028927 Camellia sinensis var. sinensis
DCAR_030970 Daucus carota
Dinv32044 Davidia involucrata
Duzib128G1167 Durio zibethinus
ECA233G2007 Erigeron canadensis
EL10Ac2g02848 Beta vulgaris
EL10Ac6g14477 Beta vulgaris
Eucgr.G03251 Eucalyptus grandis
FAN03G0199 Fragaria x ananassa
FAN03G1284 Fragaria x ananassa
FAN06G1855 Fragaria x ananassa
FAN10G1920 Fragaria x ananassa
FAN10G2896 Fragaria x ananassa
FvH4_7g02470 Fragaria vesca
FvH4_7g04360 Fragaria vesca
Glyma.04G139900 Glycine max
Glyma.11G152600 Glycine max
Gohir.A06G159200 Gossypium hirsutum
Gohir.A11G255450 Gossypium hirsutum
Gohir.D06G165100 Gossypium hirsutum
Gohir.D12G108500 Gossypium hirsutum
Gorai.008G117500 Gossypium raimondii
Gorai.010G192500 Gossypium raimondii
GSVIVG01000834001 Vitis vinifera
HanXRQChr15g0469031 Helianthus annuus
Haze_07686 Corylus avellana
Haze_09336 Corylus avellana
Haze_26453 Corylus avellana
HPP92_017907 Vanilla planifolia
Hund13333 Selenicereus undatus
Lalb_Chr20g0109051 Lupinus albus
Lj3g0011019 Lotus japonicus
Lj7A582G32 Lonicera japonica
Lsat_1_v5_gn_5_69441 Lactuca sativa
Manes.11G003480 Manihot esculenta
Mapoly0031s0129 Marchantia polymorpha
MCO12G196 Micromonas commoda
MD05G1030400 Malus domestica
MD10G1031800 Malus domestica
MD13G1104900 Malus domestica
Medtr3g019370 Medicago truncatula
MELO3C005127.2 Cucumis melo
Migut.H00453 Erythranthe guttata
MSTRG.2896 Avicennia marina
Nitab4.5_0000624g0090 Nicotiana tabacum
Nitab4.5_0001311g0150 Nicotiana tabacum
Nitab4.5_0006654g0020 Nicotiana tabacum
Nitab4.5_0021326g0010 Nicotiana tabacum
Nn7g36505 Nelumbo nucifera
Oeu049664.1 Olea europaea
Os08g0155000 Oryza sativa ssp. japonica
Peaxi162Scf00211g01210 Petunia axillaris
Peaxi162Scf01810g00112 Petunia axillaris
PGR031G2712 Punica granatum
PGSC0003DMG400000394 Solanum tuberosum
PGSC0003DMG400016389 Solanum tuberosum
Phvul.005G031000 Phaseolus vulgaris
Potri.001G024500 Populus trichocarpa
Potri.003G201100 Populus trichocarpa
Pp3c25_4340 Physcomitrium patens
Pp3c25_4350 Physcomitrium patens
Pp3c25_4370 Physcomitrium patens
PRCOL_00000378 Prasinoderma coloniale
Prupe.2G030400 Prunus persica
Prupe.2G030500 Prunus persica
Prupe.4G022800 Prunus persica
Prupe.8G084000 Prunus persica
Prupe.8G084400 Prunus persica
Prupe.8G084800 Prunus persica
Prupe.I005600 Prunus persica
Psat4g000640 Pisum sativum
Psat4g015320 Pisum sativum
Psat5g217400 Pisum sativum
PSO017G0587 Papaver somniferum
PSO478G1616 Papaver somniferum
QL04p014055 Quercus lobata
RcHm_v2.0_Chr1g0319831 Rosa chinensis
RcHm_v2.0_Chr1g0320511 Rosa chinensis
RcHm_v2.0_Chr1g0320521 Rosa chinensis
RcHm_v2.0_Chr1g0320631 Rosa chinensis
RcHm_v2.0_Chr1g0320641 Rosa chinensis
RcHm_v2.0_Chr1g0320851 Rosa chinensis
RcHm_v2.0_Chr1g0320871 Rosa chinensis
RcHm_v2.0_Chr1g0320961 Rosa chinensis
RcHm_v2.0_Chr1g0321121 Rosa chinensis
RcHm_v2.0_Chr2g0100391 Rosa chinensis
Rhsim07G0063100 Rhododendron simsii
Sabra03G0148700 Salix brachista
SalBow5G0381 Salvia bowleyana
SalBow7G4685 Salvia bowleyana
Sc10g0004300 Simmondsia chinensis
Sed0014614 Sechium edule
Sed0015395 Sechium edule
SGA_v2.0_scaffold15G07263 Striga asiatica
SGA_v2.0_scaffold162G37895 Striga asiatica
SGA_v2.0_scaffold20G09066 Striga asiatica
SGA_v2.0_scaffold289G47250 Striga asiatica
SHI14075 Sapria himalayana
SMO118G0432 Selaginella moellendorffii
Solyc01g007250.4 Solanum lycopersicum
Solyc11g065960.3 Solanum lycopersicum
Solyc11g065980.3 Solanum lycopersicum
Sopen01g003240 Solanum pennellii
Sopen11g025700 Solanum pennellii
Sp2g00900 Schrenkiella parvula
TAR130G0001 Trochodendron aralioides
TAR623G1431 Trochodendron aralioides
TAR633G1412 Trochodendron aralioides
THA.LOC104800270 Tarenaya hassleriana
THA.LOC104824184 Tarenaya hassleriana
Thecc.10G006900 Theobroma cacao
Thhalv10023618m.g Eutrema salsugineum
TPR.G3866 Trifolium pratense
TPR.G771 Trifolium pratense
TWI15G0640 Tripterygium wilfordii
unitig_746.g26859 Utricularia gibba
vmacro13733 Vaccinium macrocarpon
VMungo1080G0371 Vigna mungo
Zm00001eb226560 Zea mays

User provided reference genes

Program Settings